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Searching for up to 100 curated homologs for GFF1251 FitnessBrowser__Phaeo:GFF1251 (448 a.a.)

Found high-coverage hits (≥70%) to 15 curated proteins.

Removed hits that are identical to the query, leaving 14

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

No hits had 30% identity

Change minimum %identity:

Additional hits (identity < 30%)

3i09A / A0A0H2WF95 Crystal structure of a periplasmic binding protein (bma2936) from burkholderia mallei at 1.80 a resolution
    25% identity, 85% coverage of query (102 bits)

fmdD / CAA75186.1 amide-urea binding protein from Methylophilus methylotrophus (see paper)
    24% identity, 88% coverage of query (66.2 bits)

HSERO_RS00870 L-proline ABC transporter, substrate-binding component from Herbaspirillum seropedicae SmR1
    25% identity, 79% coverage of query (63.2 bits)

TC 3.A.1.4.5 / Q8NRW1 UrtB, component of The high affinity urea/thiourea/hydroxyurea porter from Corynebacterium glutamicum (see paper)
    22% identity, 83% coverage of query (61.2 bits)

8hicA / Q7V3V9 Crystal structure of urta from prochlorococcus marinus str. Mit 9313 in complex with urea and calcium
    22% identity, 83% coverage of query (53.1 bits)

4gnrA / J9PBT7 1.0 angstrom resolution crystal structure of the branched-chain amino acid transporter substrate binding protein livj from streptococcus pneumoniae str. Canada mdr_19a in complex with isoleucine
    24% identity, 79% coverage of query (50.4 bits)

4n0qB / Q8YEE8 Crystal structure of an abc transporter, substrate-binding protein from brucella melitensis 16m in complex with l-leucine using a crystal grown in a crystal former (microlytic)
    24% identity, 73% coverage of query (50.1 bits)

TC 3.A.1.4.10 / Q8DQI1 ABC transporter substrate-binding protein-branched chain amino acid transport, component of The branched chain hydrophobic amino acid transporter, LivJFGHM from Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
    24% identity, 79% coverage of query (49.3 bits)

7s6eB / Q0I663 Crystal structure of urta from synechococcus cc9311 in complex with urea and calcium
    20% identity, 75% coverage of query (48.9 bits)

3ipcA Structure of atu2422-gaba f77a mutant receptor in complex with leucine
    24% identity, 75% coverage of query (45.8 bits)

3ip9A Structure of atu2422-gaba receptor in complex with gaba
    24% identity, 75% coverage of query (44.7 bits)

3ip7A Structure of atu2422-gaba receptor in complex with valine
    24% identity, 75% coverage of query (44.7 bits)

3ip6A Structure of atu2422-gaba receptor in complex with proline
    24% identity, 75% coverage of query (44.7 bits)

3ip5A / Q7CX36 Structure of atu2422-gaba receptor in complex with alanine (see paper)
    24% identity, 75% coverage of query (44.7 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory