Sites on a Tree

 

Searching for up to 100 curated homologs for GFF1359 FitnessBrowser__psRCH2:GFF1359 (146 a.a.)

Found high-coverage hits (≥70%) to 2 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

pcaC / AAC37152.1 gamma-carboxymuconolactone decarboxylase from Acinetobacter baylyi (see 11 papers)
    30% identity, 79% coverage of query (52.4 bits)

Build an alignment

Build an alignment for GFF1359 and 1 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

Q6SJC5 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Roseovarius nubinhibens ISM (see paper)
    26% identity, 82% coverage of query (47.0 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory