Searching for up to 100 curated homologs for GFF1392 FitnessBrowser__Phaeo:GFF1392 (196 a.a.)

Found high-coverage hits (≥70%) to 22 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

CCNA_03103 shikimate kinase (EC 2.7.1.71) from Caulobacter crescentus NA1000
    55% identity, 74% coverage of query (160 bits)

A0A0M3KL09 shikimate kinase (EC 2.7.1.71) from Acinetobacter baumannii (see paper)
4y0aA / A0A0M3KL09 Shikimate kinase from acinetobacter baumannii in complex with shikimate (see paper)
    38% identity, 83% coverage of query (116 bits)

AroK / b3390 shikimate kinase 1 (EC 2.7.1.71) from Escherichia coli K-12 substr. MG1655 (see 31 papers)
aroK / P0A6D7 shikimate kinase 1 (EC 2.7.1.71) from Escherichia coli (strain K12) (see 30 papers)
AROK_ECOLI / P0A6D7 Shikimate kinase 1; SK 1; Shikimate kinase I; SKI; EC 2.7.1.71 from Escherichia coli (strain K12) (see 3 papers)
P0A6D7 shikimate kinase (EC 2.7.1.71) from Escherichia coli (see paper)
aroK / AAB59099.1 shikimic acid kinase I from Escherichia coli (see paper)
    38% identity, 87% coverage of query (111 bits)

SK3_ORYSJ / Q7X7H9 Shikimate kinase 3, chloroplastic; OsSK3; EC 2.7.1.71 from Oryza sativa subsp. japonica (Rice) (see paper)
Q7X7H9 shikimate kinase (EC 2.7.1.71) from Oryza sativa (see paper)
    41% identity, 78% coverage of query (99.8 bits)

SK1 / Q9SJ05 shikimate kinase (EC 2.7.1.71) from Arabidopsis thaliana (see 3 papers)
SK1_ARATH / Q9SJ05 Shikimate kinase 1, chloroplastic; AtSK1; EC 2.7.1.71 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
    39% identity, 74% coverage of query (97.4 bits)

SK_SOLLC / Q00497 Shikimate kinase, chloroplastic; EC 2.7.1.71 from Solanum lycopersicum (Tomato) (Lycopersicon esculentum) (see paper)
    41% identity, 73% coverage of query (92.8 bits)

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Build an alignment for GFF1392 and 6 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

Q6GGG1 shikimate kinase (EC 2.7.1.71) from Staphylococcus aureus (see paper)
    27% identity, 86% coverage of query (89.4 bits)

SK2 / Q8GY88 shikimate kinase (EC 2.7.1.71) from Arabidopsis thaliana (see 3 papers)
SK2_ARATH / Q8GY88 Shikimate kinase 2, chloroplastic; AtSK2; EC 2.7.1.71 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
Q8GY88 shikimate kinase (EC 2.7.1.71) from Arabidopsis thaliana (see paper)
    37% identity, 76% coverage of query (88.6 bits)

SK1_ORYSJ / Q5NTH4 Shikimate kinase 1, chloroplastic; OsSK1; EC 2.7.1.71 from Oryza sativa subsp. japonica (Rice) (see paper)
Q5NTH4 shikimate kinase (EC 2.7.1.71) from Oryza sativa (see paper)
    37% identity, 74% coverage of query (88.2 bits)

SK2_ORYSJ / Q5NTH3 Shikimate kinase 2, chloroplastic; OsSK2; EC 2.7.1.71 from Oryza sativa subsp. japonica (Rice) (see paper)
Q5NTH3 shikimate kinase (EC 2.7.1.71) from Oryza sativa (see paper)
    37% identity, 74% coverage of query (87.8 bits)

2shkB The three-dimensional structure of shikimate kinase from erwinia chrysanthemi complexed with adp
    35% identity, 73% coverage of query (77.4 bits)

AROL_DICCH / P10880 Shikimate kinase 2; SK 2; Shikimate kinase II; SKII; EC 2.7.1.71 from Dickeya chrysanthemi (Pectobacterium chrysanthemi) (Erwinia chrysanthemi) (see 4 papers)
    34% identity, 73% coverage of query (76.3 bits)

1shkA The three-dimensional structure of shikimate kinase from erwinia chrysanthemi
    34% identity, 73% coverage of query (75.9 bits)

1e6cA / P10880 K15m mutant of shikimate kinase from erwinia chrysanthemi (see paper)
    34% identity, 73% coverage of query (73.9 bits)

bzdR / AAQ08805.1 BzdR from Azoarcus sp. CIB (see paper)
    28% identity, 86% coverage of query (68.6 bits)

1zuiA Structural basis for shikimate-binding specificity of helicobacter pylori shikimate kinase
    27% identity, 83% coverage of query (68.2 bits)

3n2eA / P56073 Crystal structure of helicobactor pylori shikimate kinase in complex with nsc162535 (see paper)
    27% identity, 86% coverage of query (66.2 bits)

AROK_HELPY / P56073 Shikimate kinase; SK; EC 2.7.1.71 from Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori) (see paper)
    28% identity, 82% coverage of query (65.1 bits)

3mufA Shikimate kinase from helicobacter pylori in complex with shikimate-3- phosphate and adp
    28% identity, 83% coverage of query (65.1 bits)

DvMF_0971 Homoserine kinase (EC:2.7.1.39) from Desulfovibrio vulgaris Miyazaki F
thrB / B8DPL9 homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris (strain DSM 19637 / Miyazaki F) (see paper)
    32% identity, 76% coverage of query (63.9 bits)

6hqvA / G0S061 Pentafunctional arom complex from chaetomium thermophilum (see paper)
    26% identity, 76% coverage of query (55.1 bits)

SKL1_ARATH / Q9LW20 Probable inactive shikimate kinase like 1, chloroplastic; AtSKL1 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
    28% identity, 74% coverage of query (51.2 bits)

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