Searching for up to 100 curated homologs for GFF1392 FitnessBrowser__WCS417:GFF1392 (327 a.a.)
Found high-coverage hits (≥70%) to 10 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
TC 2.A.80.1.1 / Q9FA46 TctC aka STM2786, component of The tricarboxylate transporter, TctABC from Salmonella enterica (see paper)
63% identity, 97% coverage of query (418 bits)
HP15_2661 Citrate uptake transporter, substrate-binding component TctC from Marinobacter adhaerens HP15
37% identity, 91% coverage of query (189 bits)
Build an alignment for GFF1392 and 2 homologs with ≥ 30% identity
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TC 2.A.80.1.4 / S5XTE7 Citrate uptake transporter, substrate binding protein, component of Pmf-dependent citrate uptake porter, TctABC from Corynebacterium glutamicum MB001
29% identity, 90% coverage of query (118 bits)
Dshi_3123 Tricarboxylate transport protein TctC from Dinoroseobacter shibae DFL-12
25% identity, 79% coverage of query (96.7 bits)
2dvzA / Q7W0A0 Structure of a periplasmic transporter (see paper)
27% identity, 86% coverage of query (63.2 bits)
TC 2.A.80.1.2 / Q5D0X7 Terephthalate permease, component of Terephthalate (TPA) aromatic acid uptake transport system, TpiBA/TphC from Comamonas testosteroni
24% identity, 76% coverage of query (57.4 bits)
tphCII / BAE47084.1 periplasmic terephthalate binding receptor from Comamonas sp. E6 (see paper)
22% identity, 95% coverage of query (56.2 bits)
7ndsA / A0A5N7XFM8 Crystal structure of tphc in a closed conformation (see paper)
22% identity, 89% coverage of query (55.1 bits)
7ndrD Crystal structure of tphc in an open conformation
22% identity, 89% coverage of query (54.7 bits)
iphC / BAH70270.1 periplasmic isophthalate binding receptor from Comamonas sp. E6 (see 2 papers)
22% identity, 89% coverage of query (48.5 bits)
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Lawrence Berkeley National Laboratory