Sites on a Tree

 

Searching for up to 100 curated homologs for GFF1422 FitnessBrowser__WCS417:GFF1422 (252 a.a.)

Found high-coverage hits (≥70%) to 1 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

AIS_PSESP / A0A0A1H8I4 Aconitate isomerase; AI; EC 5.3.3.7 from Pseudomonas sp. (see paper)
A0A0A1H8I4 aconitate DELTA-isomerase (EC 5.3.3.7) from Pseudomonas sp. WU-0701 (see paper)
    46% identity, 90% coverage of query (191 bits)

Build an alignment

Build an alignment for GFF1422 and 1 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory