Searching for up to 100 curated homologs for GFF1614 FitnessBrowser__Marino:GFF1614 (571 a.a.)
Found high-coverage hits (≥70%) to 13 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
fdh1B / Q8KTI8 NAD-dependent formate dehydrogenase β subunit (EC 1.17.1.9) from Methylorubrum extorquens (see 2 papers)
Q8KTI8 formate dehydrogenase (EC 1.17.1.9) from Methylorubrum extorquens (see paper)
57% identity, 95% coverage of query (584 bits)
7vw6B / C5ATT6 Cryo-em structure of formate dehydrogenase 1 from methylorubrum extorquens am1 (see paper)
57% identity, 95% coverage of query (584 bits)
hymB / GI|14250934 protein HymB from Eubacterium acidaminophilum (see paper)
35% identity, 81% coverage of query (297 bits)
7q4vB / H6LFG4 Electron bifurcating hydrogenase - hydabc from a. Woodii (see paper)
37% identity, 80% coverage of query (297 bits)
hydB / Q8RBC9 NADH-dependent hydrogenase β subunit (EC 1.12.1.2) from Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) (see 2 papers)
37% identity, 80% coverage of query (288 bits)
K0B622 formate dehydrogenase (NAD+, ferredoxin) (subunit 2/4) (EC 1.17.1.11) from Gottschalkia acidurici (see paper)
36% identity, 75% coverage of query (287 bits)
hydB / O52682 hydrogenase β subunit (EC 1.12.1.4) from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) (see 2 papers)
HYDB_THEMA / O52682 Bifurcating [FeFe] hydrogenase beta subunit; Hydrogenase (NAD(+), ferredoxin) beta subunit; Iron-hydrogenase beta subunit; EC 1.12.1.4 from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) (see 2 papers)
35% identity, 80% coverage of query (286 bits)
7p8nB / O52682 Tmhydabc- t. Maritima hydrogenase with bridge closed (see paper)
35% identity, 80% coverage of query (286 bits)
6vw7D / Q0KDY2 Formate dehydrogenase fdsabg subcomplex fdsbg from c. Necator - nadh bound (see paper)
37% identity, 71% coverage of query (254 bits)
fdsB / GI|3724144 NAD-dependent formate dehydrogenase, beta subunit from Ralstonia eutropha H16 (see 2 papers)
fdsB / CAA11234.1 NAD-dependent formate dehydrogenase beta subunit from Cupriavidus necator (see paper)
35% identity, 73% coverage of query (246 bits)
hoxF / P22317 α subunit from Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) (see paper)
P22317 hydrogen dehydrogenase (EC 1.12.1.2) from Cupriavidus necator (see paper)
32% identity, 92% coverage of query (243 bits)
5xf9A Crystal structure of NAD+-reducing [nife]-hydrogenase in the air- oxidized state
36% identity, 90% coverage of query (242 bits)
5xfaA / A0A077L6X8 Crystal structure of NAD+-reducing [nife]-hydrogenase in the h2- reduced state (see paper)
36% identity, 90% coverage of query (241 bits)
Build an alignment for GFF1614 and 13 homologs with ≥ 30% identity
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Lawrence Berkeley National Laboratory