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Searching for up to 100 curated homologs for GFF1775 PGA1_c17990 D-malate dehydrogenase (354 a.a.)

Found high-coverage hits (≥70%) to 100 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

EBL86_19295 / A0A3G6WGL6 L-tartrate dehydrogenase/D-malate dehydrogenase (decarboxylating)/meso-tartrate decarboxylase monomer (EC 1.1.1.83; EC 1.1.1.93) from Cereibacter sphaeroides (see 2 papers)
    61% identity, 98% coverage of query (417 bits)

YeaU / b1800 D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli K-12 substr. MG1655 (see 7 papers)
dmlA / P76251 D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli (strain K12) (see 5 papers)
DMLA_ECOLI / P76251 D-malate dehydrogenase [decarboxylating]; D-malate degradation protein A; D-malate oxidase; EC 1.1.1.83 from Escherichia coli (strain K12) (see 2 papers)
P76251 D-malate dehydrogenase (decarboxylating) (EC 1.1.1.83) from Escherichia coli (see paper)
yeaU / RF|NP_416314 D-malate dehydrogenase [decarboxylating] from Escherichia coli K12 (see 3 papers)
    58% identity, 99% coverage of query (414 bits)

3flkA / Q51945 Crystal structure of tartrate dehydrogenase from pseudomonas putida in complex with nadh, oxalate and metal ion (see paper)
    57% identity, 99% coverage of query (413 bits)

U05986.1 / Q51945 tartrate dehydrogenase subunit (EC 1.1.1.83; EC 1.1.1.93) from Pseudomonas putida (see 7 papers)
TTUC_PSEPU / Q51945 Tartrate dehydrogenase/decarboxylase; TDH; D-malate dehydrogenase [decarboxylating]; EC 1.1.1.93; EC 4.1.1.73; EC 1.1.1.83 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see paper)
    57% identity, 99% coverage of query (405 bits)

2g4oA / P9WKK9 Anomalous substructure of 3-isopropylmalate dehydrogenase (see paper)
    42% identity, 94% coverage of query (241 bits)

LEU3_MYCTU / P9WKK9 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
    42% identity, 94% coverage of query (241 bits)

P94929 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Mycobacterium tuberculosis variant bovis (see paper)
    42% identity, 94% coverage of query (240 bits)

MJ0720 / Q58130 3-isopropylmalate dehydrogenase subunit (EC 1.1.1.85) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (see 2 papers)
LEU3_METJA / Q58130 3-isopropylmalate/3-methylmalate dehydrogenase; 3-isopropylmalate dehydrogenase; 3-IPM-DH; IMDH; IPMDH; Beta-IPM dehydrogenase; D-malate dehydrogenase [decarboxylating]; EC 1.1.1.85; EC 1.1.1.n5; EC 1.1.1.83 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see paper)
    40% identity, 95% coverage of query (221 bits)

hicdh / Q5SIJ1 homoisocitrate dehydrogenase subunit (EC 1.1.1.87) from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see paper)
HICDH_THET8 / Q5SIJ1 Isocitrate/homoisocitrate dehydrogenase; Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.286 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see paper)
HICDH_THET2 / Q72IW9 Isocitrate/homoisocitrate dehydrogenase; Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.286 from Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27) (see 4 papers)
Q5SIJ1 homoisocitrate dehydrogenase (EC 1.1.1.87) from Thermus thermophilus (see paper)
    38% identity, 99% coverage of query (220 bits)

3asjA / Q5SIJ1 Crystal structure of homoisocitrate dehydrogenase in complex with a designed inhibitor (see paper)
    38% identity, 99% coverage of query (220 bits)

4yb4A Crystal structure of homoisocitrate dehydrogenase from thermus thermophilus in complex with homoisocitrate, magnesium ion (ii) and nadh
    38% identity, 99% coverage of query (220 bits)

3asjB Crystal structure of homoisocitrate dehydrogenase in complex with a designed inhibitor
    38% identity, 99% coverage of query (220 bits)

ecm3 / Q0X0C1 (2S,3R)-2-[(2-aminophenyl)amino]-3-carboxy-3-hydroxypropanoate dehydrogenase from Streptomyces lasalocidi (see 2 papers)
    40% identity, 99% coverage of query (219 bits)

aksF / Q58991 NAD-dependent threo-isocitrate dehydrogenase (EC 1.1.1.87) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (see paper)
AKSF_METJA / Q58991 Homoisocitrate dehydrogenase; HICDH; Homo(2)-isocitrate/homo(3)-isocitrate dehydrogenase; Isohomocitrate dehydrogenase; IHDH; NAD-dependent threo-isohomocitrate dehydrogenase; EC 1.1.1.87; EC 1.1.1.- from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see 2 papers)
Q58991 methanogen homoaconitase (EC 4.2.1.114) from Methanocaldococcus jannaschii (see paper)
    38% identity, 95% coverage of query (212 bits)

LYS12_YEAST / P40495 Homoisocitrate dehydrogenase, mitochondrial; HIcDH; EC 1.1.1.87 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 8 papers)
P40495 homoisocitrate dehydrogenase (EC 1.1.1.87) from Saccharomyces cerevisiae (see 2 papers)
    36% identity, 96% coverage of query (207 bits)

6m3sB / A0A0H2XBX7 Dimeric isocitrate dehydrogenase from xanthomonas campestris pv. Campestris 8004
    37% identity, 100% coverage of query (201 bits)

lysB putative homoisocitrate dehydrogenase from Emericella nidulans (see paper)
    36% identity, 96% coverage of query (197 bits)

hdh / BAD06515.1 homoisocitrate dehydrogenase, partial from Deinococcus radiodurans (see paper)
    35% identity, 99% coverage of query (196 bits)

P43860 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Haemophilus influenzae (see paper)
    37% identity, 94% coverage of query (196 bits)

6xxyA / P43860 Crystal structure of haemophilus influenzae 3-isopropylmalate dehydrogenase in complex with o-isobutenyl oxalylhydroxamate. (see paper)
    37% identity, 94% coverage of query (195 bits)

LYS12_SCHPO / O14104 Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.87 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
    36% identity, 100% coverage of query (194 bits)

LEU3_SALTY / P37412 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 3 papers)
P37412 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Salmonella enterica subsp. enterica serovar Typhimurium (see paper)
1cnzA / P37412 3-isopropylmalate dehydrogenase (ipmdh) from salmonella typhimurium (see paper)
    36% identity, 92% coverage of query (194 bits)

P24098 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Thermus aquaticus (see paper)
    36% identity, 98% coverage of query (194 bits)

2y42D / Q5SIY4 Structure of isopropylmalate dehydrogenase from thermus thermophilus - complex with nadh and mn (see paper)
    36% identity, 98% coverage of query (193 bits)

3ty3A / O14104 Crystal structure of homoisocitrate dehydrogenase from schizosaccharomyces pombe bound to glycyl-glycyl-glycine (see paper)
    36% identity, 98% coverage of query (193 bits)

2y41A Structure of isopropylmalate dehydrogenase from thermus thermophilus - complex with ipm and mn
    36% identity, 99% coverage of query (193 bits)

LEU3_THET8 / Q5SIY4 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see 4 papers)
Q5SIY4 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Thermus thermophilus (see 12 papers)
    36% identity, 99% coverage of query (192 bits)

P61495 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Thermus thermophilus (see paper)
    36% identity, 99% coverage of query (192 bits)

2ztwA Structure of 3-isopropylmalate dehydrogenase in complex with the inhibitor and NAD+
    36% identity, 99% coverage of query (192 bits)

P61494 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Thermus thermophilus (see 2 papers)
    36% identity, 99% coverage of query (190 bits)

3vkzA / Q8E9N3 3-isopropylmalate dehydrogenase from shewanella oneidensis mr-1 at atmospheric pressure (see paper)
    37% identity, 92% coverage of query (189 bits)

LeuB / b0073 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
leuB / P30125 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Escherichia coli (strain K12) (see 12 papers)
LEU3_ECOLI / P30125 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Escherichia coli (strain K12) (see 2 papers)
P30125 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Escherichia coli (see 2 papers)
leuB / BAA04537.1 3-isopropylmalate dehydrogenase from Escherichia coli (see paper)
    36% identity, 92% coverage of query (189 bits)

Q8E9N3 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Shewanella oneidensis (see 4 papers)
    37% identity, 92% coverage of query (189 bits)

IMDH3 / Q9FMT1 isopropylmalate dehydrogenase 3 (EC 1.1.1.85) from Arabidopsis thaliana (see paper)
LEU31_ARATH / Q9FMT1 3-isopropylmalate dehydrogenase 1, chloroplastic; 3-IPM-DH 1; AtIMDH1; IMDH 1; Beta-IPM dehydrogenase 1; Isopropylmalate dehydrogenase 1; AtIMD1; Methylthioalkylmalate dehydrogenase 1; EC 1.1.1.85 from Arabidopsis thaliana (Mouse-ear cress) (see 5 papers)
Q9FMT1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Arabidopsis thaliana (see 4 papers)
    36% identity, 92% coverage of query (186 bits)

IDH-V / Q945K7 NAD+-dependent isocitrate dehydrogenase catalytic subunit (EC 1.1.1.286) from Arabidopsis thaliana (see 3 papers)
IDH5_ARATH / Q945K7 Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial; IDH-V; Isocitric dehydrogenase 5; NAD(+)-specific ICDH 5; EC 1.1.1.41 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
Q945K7 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana (see 2 papers)
    36% identity, 97% coverage of query (185 bits)

6lkyA / Q602J2 Crystal structure of isocitrate dehydrogenase from methylococcus capsulatus
    35% identity, 96% coverage of query (184 bits)

LEU33_ARATH / Q9SA14 3-isopropylmalate dehydrogenase 3, chloroplastic; 3-IPM-DH 3; AtIMDH2; AtIMDH3; IMDH 3; Beta-IPM dehydrogenase 3; Isopropylmalate dehydrogenase 3; AtIMD3; EC 1.1.1.85 from Arabidopsis thaliana (Mouse-ear cress) (see 4 papers)
Q9SA14 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Arabidopsis thaliana (see 3 papers)
    35% identity, 92% coverage of query (182 bits)

IDH6_ARATH / Q8LG77 Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial; IDH-VI; Isocitric dehydrogenase 6; NAD(+)-specific ICDH 6; EC 1.1.1.41 from Arabidopsis thaliana (Mouse-ear cress) (see 2 papers)
Q8LG77 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Arabidopsis thaliana (see paper)
    36% identity, 96% coverage of query (182 bits)

D2YZL2 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Shewanella benthica (see 3 papers)
    35% identity, 92% coverage of query (181 bits)

3vmkA / D2YZL2 3-isopropylmalate dehydrogenase from shewanella benthica db21 mt-2 (see paper)
    35% identity, 92% coverage of query (181 bits)

IDH3A_MOUSE / Q9D6R2 Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Mus musculus (Mouse) (see paper)
Q9D6R2 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Mus musculus (see paper)
    33% identity, 95% coverage of query (179 bits)

IDH3A_PIG / P56471 Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Sus scrofa (Pig) (see paper)
    33% identity, 95% coverage of query (179 bits)

IDH3A / P50213 Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.286) from Homo sapiens (see 2 papers)
IDH3A_HUMAN / P50213 Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Homo sapiens (Human) (see 5 papers)
P50213 isocitrate dehydrogenase (NAD+) (subunit 2/2) (EC 1.1.1.41) from Homo sapiens (see paper)
    33% identity, 95% coverage of query (179 bits)

8grdA Crystal structure of a constitutively active mutant of the alpha beta heterodimer of human idh3 in complex with adp and mg
    34% identity, 95% coverage of query (179 bits)

5greA Crystal structure of the alpha gamma heterodimer of human idh3 in complex with mg(2+), citrate and adp
    33% identity, 95% coverage of query (179 bits)

6kdyA Crystal structure of the alpha bata heterodimer of human idh3 in complex with NAD.
    33% identity, 95% coverage of query (179 bits)

6kdeA / P50213 Crystal structure of the alpha beta heterodimer of human idh3 in complex with ca(2+) (see paper)
    33% identity, 95% coverage of query (178 bits)

IDH3A_BOVIN / P41563 Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitrate dehydrogenase subunits 3/4; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Bos taurus (Bovine) (see paper)
    33% identity, 95% coverage of query (178 bits)

5yvtA Crystal structure of the alpha gamma heterodimer of human idh3 in complex with mg(2+) and nadh
    34% identity, 95% coverage of query (178 bits)

LEU3_SULTO / P50455 3-isopropylmalate dehydrogenase; 3-IPM-DH; IMDH; Beta-IPM dehydrogenase; EC 1.1.1.85 from Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) (Sulfolobus tokodaii) (see paper)
P50455 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Sulfurisphaera tokodaii (see 3 papers)
    34% identity, 95% coverage of query (177 bits)

6l59A Crystal structure of the alpha gamma heterodimer of human idh3 in complex with cit, mg and atp binding at allosteric site and mg, atp binding at active site.
    33% identity, 95% coverage of query (177 bits)

LEU32_ARATH / P93832 3-isopropylmalate dehydrogenase 2, chloroplastic; 3-IPM-DH 2; AtIMDH2; AtIMDH3; IMDH 2; Beta-IPM dehydrogenase 2; Isopropylmalate dehydrogenase 2; AtIMD2; EC 1.1.1.85 from Arabidopsis thaliana (Mouse-ear cress) (see 4 papers)
P93832 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Arabidopsis thaliana (see 4 papers)
    34% identity, 92% coverage of query (176 bits)

IDH3A_CAEEL / Q93714 Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Caenorhabditis elegans (see paper)
    34% identity, 98% coverage of query (176 bits)

5j32A / P93832 Isopropylmalate dehydrogenase in complex with isopropylmalate (see paper)
    34% identity, 92% coverage of query (176 bits)

5j33A Isopropylmalate dehydrogenase in complex with NAD+
    34% identity, 92% coverage of query (176 bits)

LEU3_HEYCO / P12010 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Heyndrickxia coagulans (Weizmannia coagulans) (see paper)
    34% identity, 91% coverage of query (174 bits)

IDH3A_RAT / Q99NA5 Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41 from Rattus norvegicus (Rat) (see paper)
Q99NA5 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Rattus norvegicus (see paper)
    33% identity, 95% coverage of query (174 bits)

Q4JB37 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Sulfolobus acidocaldarius (see paper)
    33% identity, 95% coverage of query (174 bits)

4y1pB / Q4JB37 Crystal structure of 3-isopropylmalate dehydrogenase (saci_0600) from sulfolobus acidocaldarius complex with 3-isopropylmalate and mg2+ (see paper)
    33% identity, 95% coverage of query (174 bits)

P29102 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Brassica napus (see paper)
    34% identity, 92% coverage of query (173 bits)

HICDH_PYRHO / O59394 Isocitrate/homoisocitrate dehydrogenase; HICDH; Beta-decarboxylating dehydrogenase; EC 1.1.1.286 from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (see paper)
    37% identity, 86% coverage of query (170 bits)

2d1cA / P33197 Crystal structure of tt0538 protein from thermus thermophilus hb8
    35% identity, 94% coverage of query (169 bits)

P33197 isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) from Thermus thermophilus (see 2 papers)
icd / RF|YP_144801.1 isocitrate dehydrogenase (NADP(+)); EC 1.1.1.42 from Thermus thermophilus HB8 (see 2 papers)
    35% identity, 94% coverage of query (169 bits)

G1APK3 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Rhodotorula toruloides (see paper)
    36% identity, 99% coverage of query (167 bits)

IDH2_SCHPO / Q9USP8 Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial; Isocitric dehydrogenase; NAD(+)-specific ICDH; EC 1.1.1.41 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see 3 papers)
    32% identity, 99% coverage of query (166 bits)

idh2 / RF|NP_595203.1 isocitrate dehydrogenase (NAD+) subunit 2; EC 1.1.1.41 from Schizosaccharomyces pombe (see 2 papers)
    32% identity, 99% coverage of query (166 bits)

Q5JFV8 isocitrate-homoisocitrate dehydrogenase (EC 1.1.1.286) from Thermococcus kodakarensis (see paper)
    35% identity, 95% coverage of query (163 bits)

5hn4A / Q5JFV8 Crystal structure of beta-decarboxylating dehydrogenase (tk0280) from thermococcus kodakarensis complexed with mn and homoisocitrate (see paper)
    35% identity, 95% coverage of query (163 bits)

5hn6A Crystal structure of beta-decarboxylating dehydrogenase (tk0280) from thermococcus kodakarensis complexed with mn and 3-isopropylmalate
    35% identity, 95% coverage of query (163 bits)

P31958 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Clostridium pasteurianum (see paper)
leuB / AAC41394.1 isopropylmalate dehydrogenase from Clostridium pasteurianum (see paper)
    32% identity, 92% coverage of query (161 bits)

IDH2 / P28241 isocitrate dehydrogenase [NAD] β subunit (EC 1.1.1.286) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (see paper)
IDH2_YEAST / P28241 Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial; Isocitric dehydrogenase; NAD(+)-specific ICDH; EC 1.1.1.41 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 2 papers)
P28241 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Saccharomyces cerevisiae (see paper)
    33% identity, 99% coverage of query (159 bits)

1a05A / Q56268 Crystal structure of the complex of 3-isopropylmalate dehydrogenase from thiobacillus ferrooxidans with 3-isopropylmalate (see paper)
    34% identity, 91% coverage of query (159 bits)

3blwF / P28241 Yeast isocitrate dehydrogenase with citrate and amp bound in the regulatory subunits (see paper)
    33% identity, 99% coverage of query (159 bits)

LEU3_ACIFR / Q56268 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Acidithiobacillus ferrooxidans (Thiobacillus ferrooxidans) (see 2 papers)
Q56268 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Acidithiobacillus ferrooxidans (see paper)
    34% identity, 91% coverage of query (159 bits)

LEU3_HALVD / D4GYE8 3-isopropylmalate dehydrogenase; EC 1.1.1.85 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see paper)
    34% identity, 99% coverage of query (158 bits)

leuB / P24015 β-isopropylmalate dehydrogenase subunit (EC 1.1.1.85) from Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) (see 2 papers)
P24015 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Leptospira interrogans (see paper)
leuB / AAA72088.1 3-isopropylmalate dehydrogenase from Leptospira borgpetersenii (see paper)
    34% identity, 95% coverage of query (157 bits)

P54354 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Bacteroides fragilis (see paper)
leuB / BAA08117.1 beta-isopropylmalate dehydrogenase from Bacteroides fragilis (see paper)
    30% identity, 91% coverage of query (157 bits)

IDH1 / P28834 isocitrate dehydrogenase [NAD] α subunit (EC 1.1.1.286) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (see paper)
IDH1_YEAST / P28834 Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial; Isocitric dehydrogenase; NAD(+)-specific ICDH; EC 1.1.1.41 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
P28834 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41) from Saccharomyces cerevisiae (see paper)
    31% identity, 99% coverage of query (157 bits)

3blvC / P28834 Yeast isocitrate dehydrogenase with citrate bound in the regulatory subunits (see paper)
    31% identity, 99% coverage of query (156 bits)

hphB / B2J8P1 2-benzyl-3-hydroxybutanedioate dehydrogenase (EC 1.1.1.85) from Nostoc punctiforme (strain ATCC 29133 / PCC 73102) (see paper)
    34% identity, 87% coverage of query (156 bits)

3blwA Yeast isocitrate dehydrogenase with citrate and amp bound in the regulatory subunits
    31% identity, 99% coverage of query (156 bits)

4xxvA Crystal structure of 3-isopropylmalate dehydrogenase from burkholderia thailandensis in complex with NAD
    32% identity, 91% coverage of query (150 bits)

4iwhA / Q2T7H6 Crystal structure of a 3-isopropylmalate dehydrogenase from burkholderia pseudomallei
    32% identity, 91% coverage of query (150 bits)

2iv0A / O29610 Thermal stability of isocitrate dehydrogenase from archaeoglobus fulgidus studied by crystal structure analysis and engineering of chimers (see paper)
    30% identity, 94% coverage of query (140 bits)

5grfB / P51553 Crystal structure of the alpha gamma mutant (gamma-k151a) of human idh3 in complex with mg(2+), citrate and adp (see paper)
    31% identity, 96% coverage of query (130 bits)

5yvtB Crystal structure of the alpha gamma heterodimer of human idh3 in complex with mg(2+) and nadh
    31% identity, 96% coverage of query (129 bits)

6l57B Crystal structure of the alpha gamma heterodimer of human idh3 in complex with cit , mg and atp binding at allosteric site.
    31% identity, 96% coverage of query (129 bits)

IDH3G / P51553 Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial (EC 1.1.1.286) from Homo sapiens (see 2 papers)
IDH3G_HUMAN / P51553 Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial; Isocitric dehydrogenase subunit gamma; NAD(+)-specific ICDH subunit gamma from Homo sapiens (Human) (see 3 papers)
P51553 isocitrate dehydrogenase (NAD+) (subunit 1/3) (EC 1.1.1.41) from Homo sapiens (see 4 papers)
    31% identity, 96% coverage of query (129 bits)

P18869 3-isopropylmalate dehydrogenase; 3-IPM-DH; IMDH; Beta-IPM dehydrogenase; EC 1.1.1.85 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
    30% identity, 98% coverage of query (128 bits)

Build an alignment

Build an alignment for GFF1775 and 89 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

2e5mA / Q96YK6 Crystal structure of isocitrate dehydrogenase from sulfolobus tokodaii strain 7 (see paper)
    28% identity, 95% coverage of query (122 bits)

1isoA Isocitrate dehydrogenase: structure of an engineered NADP+--> NAD+ specificity-reversal mutant
    30% identity, 95% coverage of query (120 bits)

2d4vA / Q8GAX0 Crystal structure of NAD dependent isocitrate dehydrogenase from acidithiobacillus thiooxidans (see paper)
    29% identity, 91% coverage of query (119 bits)

6kdyD / O43837 Crystal structure of the alpha bata heterodimer of human idh3 in complex with NAD. (see paper)
    29% identity, 95% coverage of query (118 bits)

6kdyF Crystal structure of the alpha bata heterodimer of human idh3 in complex with NAD.
    29% identity, 95% coverage of query (118 bits)

8grdB Crystal structure of a constitutively active mutant of the alpha beta heterodimer of human idh3 in complex with adp and mg
    29% identity, 95% coverage of query (117 bits)

IDH_PSEAB / Q02NB5 Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Pseudomonas aeruginosa (strain UCBPP-PA14) (see paper)
    29% identity, 95% coverage of query (117 bits)

6c0eA / Q5ZXB6 Crystal structure of isocitrate dehydrogenase from legionella pneumophila with bound NADPH with an alpha-ketoglutarate adduct
    28% identity, 93% coverage of query (113 bits)

4ajcA 3d structure of e. Coli isocitrate dehydrogenase k100m mutant in complex with alpha-ketoglutarate, calcium(ii) and adenine nucleotide phosphate
    29% identity, 95% coverage of query (113 bits)

1groA Regulatory and catalytic mechanisms in escherichia coli isocitrate dehydrogenase: multiple roles for n115
    29% identity, 95% coverage of query (112 bits)

IcdE / b1136 isocitrate dehydrogenase (EC 1.1.1.42) from Escherichia coli K-12 substr. MG1655 (see 8 papers)
icd / P08200 isocitrate dehydrogenase (EC 1.1.1.42) from Escherichia coli (strain K12) (see 3 papers)
IDH_ECOLI / P08200 Isocitrate dehydrogenase [NADP]; IDH; IDP; NADP(+)-specific ICDH; Oxalosuccinate decarboxylase; EC 1.1.1.42 from Escherichia coli (strain K12) (see 7 papers)
P08200 [Isocitrate dehydrogenase (NADP+)] kinase (EC 2.7.11.5) from Escherichia coli (see paper)
4aj3A / P08200 3d structure of e. Coli isocitrate dehydrogenase in complex with isocitrate, calcium(ii) and NADP - the pseudo-michaelis complex (see paper)
    29% identity, 95% coverage of query (111 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory