Searching for up to 100 curated homologs for GFF186 FitnessBrowser__WCS417:GFF186 (272 a.a.)
Found high-coverage hits (≥70%) to 19 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
CysU / b2424 sulfate/thiosulfate ABC transporter inner membrane subunit CysU (EC 7.3.2.3; EC 7.3.2.5) from Escherichia coli K-12 substr. MG1655 (see paper)
CysU / P16701 sulfate/thiosulfate ABC transporter inner membrane subunit CysU (EC 7.3.2.3; EC 7.3.2.5) from Escherichia coli (strain K12) (see paper)
CYST_ECOLI / P16701 Sulfate transport system permease protein CysT from Escherichia coli (strain K12) (see paper)
TC 3.A.1.6.1 / P16701 CysT aka CysU aka B2424, component of Sulfate/thiosulfate porter from Escherichia coli (see 6 papers)
49% identity, 99% coverage of query (244 bits)
SULP1_CHLRE / Q8RVC7 Sulfate permease 1, chloroplastic from Chlamydomonas reinhardtii (Chlamydomonas smithii) (see 4 papers)
TC 3.A.1.6.7 / Q8RVC7 Chloroplast sulfate permease, component of The chloroplast sulfate transporter, SulP/SulP2/Sabc/Sbp from Chlamydomonas reinhardtii (see 2 papers)
44% identity, 97% coverage of query (212 bits)
TC 3.A.1.6.3 / P71745 CysT aka RV2399C aka MTCY253.22 aka MT2470, component of Sulfate porter from Mycobacterium tuberculosis (see 3 papers)
45% identity, 94% coverage of query (212 bits)
CYST_ANTAG / Q85AI0 Probable sulfate transport system permease protein cysT from Anthoceros angustus (Hornwort) (Anthoceros formosae) (see 2 papers)
43% identity, 94% coverage of query (209 bits)
TC 3.A.1.6.3 / P71746 CysW aka RV2398C aka MT2469 aka MTCY253.23, component of Sulfate porter from Mycobacterium tuberculosis (see 2 papers)
35% identity, 92% coverage of query (144 bits)
CysW / b2423 sulfate/thiosulfate ABC transporter inner membrane subunit CysW (EC 7.3.2.3; EC 7.3.2.5) from Escherichia coli K-12 substr. MG1655 (see paper)
CysW / P0AEB0 sulfate/thiosulfate ABC transporter inner membrane subunit CysW (EC 7.3.2.3; EC 7.3.2.5) from Escherichia coli (strain K12) (see paper)
TC 3.A.1.6.1 / P0AEB0 Sulfate transport system permease protein CysW aka B2423, component of Sulfate/thiosulfate porter from Escherichia coli (see 5 papers)
33% identity, 97% coverage of query (139 bits)
SULP2_CHLRE / Q6QJE2 Sulfate permease 2, chloroplastic from Chlamydomonas reinhardtii (Chlamydomonas smithii) (see 2 papers)
TC 3.A.1.6.7 / Q6QJE2 Chloroplast sulfate permease, component of The chloroplast sulfate transporter, SulP/SulP2/Sabc/Sbp from Chlamydomonas reinhardtii (see paper)
36% identity, 83% coverage of query (128 bits)
WTPB_ARCFU / O30143 Molybdate/tungstate transport system permease protein WtpB from Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) (see paper)
TC 3.A.1.6.8 / O30143 Molybdate/tungstate transport system permease protein WtpB, component of Molybdate/tungstate transport system, ModABC (WtpABC) (ModA binds to ModBC with high affinity (0.11%u03BCM) and dissociates slowly; the complex is destabilized by nucleotide and substrate binding from Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
30% identity, 89% coverage of query (108 bits)
TC 3.A.1.8.2 / Q8TJ86 Molybdenum ABC transporter, permease protein, component of The molybdate/tungstate ABC transporter, ModABC. The trans-inhibited 3-d structure of ModABC, is available (3D31.A and 3D31.B)(Gerber et al., 2008) from Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
31% identity, 82% coverage of query (108 bits)
ModB / b0764 molybdate ABC transporter membrane subunit (EC 7.3.2.5) from Escherichia coli K-12 substr. MG1655 (see 2 papers)
ModB / P0AF01 molybdate ABC transporter membrane subunit (EC 7.3.2.5) from Escherichia coli (strain K12) (see 2 papers)
TC 3.A.1.8.1 / P0AF01 Molybdenum transport system permease protein ModB aka CHLJ aka B0764, component of Molybdate porter consisting of three proteins from Escherichia coli (see 7 papers)
modB / ECOCYC|MODB-MONOMER molybdenum transport system permease protein modB from Escherichia coli K12 (see 8 papers)
33% identity, 81% coverage of query (89.4 bits)
Build an alignment for GFF186 and 10 homologs with ≥ 30% identity
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PHNU_SALTY / P96064 Putative 2-aminoethylphosphonate transport system permease protein PhnU from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
TC 3.A.1.11.5 / P96064 PhnU aka STM0427, component of 2-aminoethyl phosphonate porter from Salmonella typhimurium (see 2 papers)
29% identity, 85% coverage of query (88.6 bits)
modB / AAB60172.1 ModB from Escherichia coli (see 2 papers)
32% identity, 81% coverage of query (88.2 bits)
TC 3.A.1.6.5 / Q8U4K4 WtpB, component of Tungsten (KM=20pM)/molybdate (KM=10nM) porter from Pyrococcus furiosus (see paper)
25% identity, 88% coverage of query (80.9 bits)
TC 3.A.1.20.2 / Q9KLQ6 Iron(III) ABC transporter, permease protein, component of Hexose-phosphate transporter from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
25% identity, 85% coverage of query (72.0 bits)
THIP_SALTY / Q8ZRV1 Thiamine transport system permease protein ThiP from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
27% identity, 99% coverage of query (71.2 bits)
SfuB / b0067 thiamine ABC transporter membrane subunit (EC 7.6.2.15) from Escherichia coli K-12 substr. MG1655 (see paper)
thiP / P31549 thiamine ABC transporter membrane subunit (EC 7.6.2.15) from Escherichia coli (strain K12) (see 2 papers)
THIP_ECOLI / P31549 Thiamine transport system permease protein ThiP from Escherichia coli (strain K12) (see 2 papers)
TC 3.A.1.19.1 / P31549 ThiP aka B0067 aka YabK, component of Thiamin, thiamin monophosphate and thiamin pyrophosphate porter. The 2.25 Å structure of ThiB (TbpA) has been solved from Escherichia coli (see 5 papers)
26% identity, 99% coverage of query (68.2 bits)
PotC / b1124 spermidine preferential ABC transporter membrane subunit PotC (EC 7.6.2.11; EC 7.6.2.16) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
PotC / P0AFK6 spermidine preferential ABC transporter membrane subunit PotC (EC 7.6.2.11) from Escherichia coli (strain K12) (see 2 papers)
POTC_ECOLI / P0AFK6 Spermidine/putrescine transport system permease protein PotC from Escherichia coli (strain K12) (see paper)
TC 3.A.1.11.1 / P0AFK6 Spermidine/putrescine transport system permease protein PotC aka B1124, component of Polyamine (putrescine/spermidine) uptake porter from Escherichia coli (see 5 papers)
potC spermidine/putrescine ABC transporter, permease protein PotC from Escherichia coli K12 (see paper)
30% identity, 81% coverage of query (65.1 bits)
TC 3.A.1.20.1 / O54371 BitE, component of The iron transporter, BitABCDEF from Treponema hyodysenteriae (Serpulina hyodysenteriae) (see paper)
26% identity, 71% coverage of query (64.7 bits)
PotI / b0857 putrescine ABC transporter membrane subunit PotI (EC 7.6.2.11; EC 7.6.2.16) from Escherichia coli K-12 substr. MG1655 (see 2 papers)
PotI / P0AFL1 putrescine ABC transporter membrane subunit PotI (EC 7.6.2.11) from Escherichia coli (strain K12) (see paper)
POTI_ECOLI / P0AFL1 Putrescine transport system permease protein PotI from Escherichia coli (strain K12) (see 3 papers)
TC 3.A.1.11.2 / P0AFL1 PotI aka B0857, component of Putrescine porter from Escherichia coli (see 5 papers)
31% identity, 81% coverage of query (60.8 bits)
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Lawrence Berkeley National Laboratory