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Searching for up to 100 curated homologs for GFF1886 FitnessBrowser__Phaeo:GFF1886 (1010 a.a.)

Found high-coverage hits (≥70%) to 7 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

soxA / Q46337 sarcosine oxidase α subunit (EC 1.5.3.24) from Corynebacterium sp. (strain P-1) (see 3 papers)
TSOXA_CORS1 / Q46337 Sarcosine oxidase subunit alpha; Sarcosine oxidase subunit A; Sarcosine oxidase (5,10-methylenetetrahydrofolate-forming) subunit alpha; Tetrameric sarcosine oxidase subunit alpha; TSOX subunit alpha; EC 1.5.3.24 from Corynebacterium sp. (strain P-1) (see 5 papers)
    41% identity, 99% coverage of query (642 bits)

TSOXA_CORS9 / Q50LF0 Sarcosine oxidase subunit alpha; Sarcosine oxidase subunit A; Sarcosine oxidase (5,10-methylenetetrahydrofolate-forming) subunit alpha; Tetrameric sarcosine oxidase subunit alpha; TSOX subunit alpha; EC 1.5.3.24 from Corynebacterium sp. (strain U-96) (see 5 papers)
Q50LF0 sarcosine oxidase (subunit 4/4) (EC 1.5.3.1) from Corynebacterium sp. U-96 (see paper)
    41% identity, 99% coverage of query (641 bits)

3ad7A / Q50LF0 Heterotetrameric sarcosine oxidase from corynebacterium sp. U-96 in complex with methylthio acetate (see paper)
    41% identity, 99% coverage of query (641 bits)

1vrqA Crystal structure of heterotetrameric sarcosine oxidase from corynebacterium sp. U-96 in complex with folinic acid
    41% identity, 99% coverage of query (641 bits)

2gagA / Q3ZDQ8 Heteroteterameric sarcosine: structure of a diflavin metaloenzyme at 1.85 a resolution (see paper)
    41% identity, 99% coverage of query (635 bits)

TSOXA_ARTSP / Q9AGP1 Sarcosine oxidase subunit alpha; Sarcosine oxidase subunit A; Sarcosine oxidase (5,10-methylenetetrahydrofolate-forming) subunit alpha; Tetrameric sarcosine oxidase subunit alpha; TSOX subunit alpha; EC 1.5.3.24 from Arthrobacter sp.
    41% identity, 99% coverage of query (628 bits)

mgdC / D7R616 N-methyl glutamate dehydrogenase γ subunit (EC 1.5.99.5) from Methyloversatilis universalis (see 2 papers)
    35% identity, 99% coverage of query (478 bits)

Build an alignment

Build an alignment for GFF1886 and 7 homologs with ≥ 30% identity

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory