Sites on a Tree

 

Searching for up to 100 curated homologs for GFF206 FitnessBrowser__psRCH2:GFF206 (147 a.a.)

Found high-coverage hits (≥70%) to 2 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

TC 2.A.80.1.1 / Q9FA45 TctB aka STM2787, component of The tricarboxylate transporter, TctABC from Salmonella enterica (see paper)
    44% identity, 95% coverage of query (90.5 bits)

HP15_2660 Citrate uptake transporter, small transmembrane component TctB from Marinobacter adhaerens HP15
    34% identity, 78% coverage of query (52.4 bits)

Build an alignment

Build an alignment for GFF206 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory