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Searching for up to 100 curated homologs for GFF2081 FitnessBrowser__Phaeo:GFF2081 (140 a.a.)

Found high-coverage hits (≥70%) to 8 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

pcaC / AAF34269.1 gamma carboxymuconolactone decarboxylase from Agrobacterium tumefaciens (see 2 papers)
    35% identity, 82% coverage of query (85.9 bits)

Q6SJC5 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Roseovarius nubinhibens ISM (see paper)
    32% identity, 92% coverage of query (84.7 bits)

Q6SJA7 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Sulfitobacter sp. (see paper)
    35% identity, 80% coverage of query (81.6 bits)

Q9L5B1 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Sagittula stellata E-37 (see paper)
    33% identity, 85% coverage of query (79.3 bits)

pcaL / AAC38246.1 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase from Rhodococcus opacus (see paper)
    33% identity, 81% coverage of query (78.6 bits)

Q0SH24 3-oxoadipate enol-lactonase (EC 3.1.1.24); 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Rhodococcus jostii (see paper)
    32% identity, 81% coverage of query (77.4 bits)

pcaC / AAC37152.1 gamma-carboxymuconolactone decarboxylase from Acinetobacter baylyi (see 11 papers)
    33% identity, 76% coverage of query (77.0 bits)

Q6SJB9 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Ruegeria pomeroyi (see paper)
    33% identity, 85% coverage of query (71.2 bits)

Build an alignment

Build an alignment for GFF2081 and 8 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory