Searching for up to 100 curated homologs for GFF2134 FitnessBrowser__WCS417:GFF2134 (739 a.a.)
Found high-coverage hits (≥70%) to 8 curated proteins.
Removed hits that are identical to the query, leaving 7
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
PP_3622 vanillin dehydrogenase, iorB-like component from Pseudomonas putida KT2440
85% identity, 99% coverage of query (1249 bits)
A0A5K7VFT8 aldehyde dehydrogenase (FAD-independent) (subunit 1/2) (EC 1.2.99.7) from Pseudomonas nitroreducens (see paper)
35% identity, 98% coverage of query (362 bits)
iorB / Q51698 isoquinoline 1-oxidoreductase subunit β (EC 1.3.99.16) from Brevundimonas diminuta (see paper)
iorB / CAA88754.1 isoquinoline 1-oxidoreductase from Brevundimonas diminuta (see paper)
30% identity, 98% coverage of query (285 bits)
A0A0Y0MN26 nicotine dehydrogenase (EC 1.5.99.4) from Shinella sp. HZN7 (see paper)
30% identity, 98% coverage of query (270 bits)
Build an alignment for GFF2134 and 4 homologs with ≥ 30% identity
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8gy3C / Q5FTD1 Cryo-em structure of membrane-bound aldehyde dehydrogenase from gluconobacter oxydans
29% identity, 92% coverage of query (231 bits)
nicB / Q88FX8 nicotinate hydroxylase large subunit (EC 1.17.2.1) from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see 2 papers)
NICB_PSEPK / Q88FX8 Nicotinate dehydrogenase subunit B; Nicotinate degradation protein B; Nicotinate dehydrogenase large subunit; EC 1.17.2.1 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see 3 papers)
Q88FX8 nicotinate dehydrogenase (EC 1.17.1.5); nicotinate dehydrogenase (cytochrome) (EC 1.17.2.1) from Pseudomonas putida (see paper)
28% identity, 97% coverage of query (194 bits)
B1PHD2 nicotinate dehydrogenase (EC 1.17.1.5) from Comamonas testosteroni (see paper)
28% identity, 98% coverage of query (193 bits)
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Lawrence Berkeley National Laboratory