Searching for up to 100 curated homologs for GFF2161 FitnessBrowser__WCS417:GFF2161 (334 a.a.)
Found high-coverage hits (≥70%) to 10 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
Pf1N1B4_411 ABC transporter for D-galactose/L-arabinose, substrate-binding component from Pseudomonas fluorescens FW300-N1B4
89% identity, 100% coverage of query (613 bits)
Pf6N2E2_5968 ABC transporter for D-galactose/L-arabinose, substrate-binding component from Pseudomonas fluorescens FW300-N2E2
86% identity, 100% coverage of query (588 bits)
AraF / b1901 arabinose ABC transporter periplasmic binding protein (EC 7.5.2.13; EC 7.5.2.12) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
AraF / P02924 arabinose ABC transporter periplasmic binding protein (EC 7.5.2.13) from Escherichia coli (strain K12) (see 2 papers)
ARAF_ECOLI / P02924 L-arabinose-binding periplasmic protein; ABP from Escherichia coli (strain K12) (see paper)
TC 3.A.1.2.2 / P02924 AraF aka B1901, component of Arabinose porter from Escherichia coli (see 10 papers)
58% identity, 96% coverage of query (368 bits)
1abeA / P02924 Novel stereospecificity of the l-arabinose-binding protein (see paper)
60% identity, 90% coverage of query (362 bits)
5abpA Substrate specificity and affinity of a protein modulated by bound water molecules
60% identity, 90% coverage of query (362 bits)
1abfA Substrate specificity and affinity of a protein modulated by bound water molecules
60% identity, 90% coverage of query (362 bits)
BPHYT_RS16935 D-galactose ABC transporter, substrate-binding component from Burkholderia phytofirmans PsJN
48% identity, 99% coverage of query (296 bits)
4kzkA / Q2T607 The structure of the periplasmic l-arabinose binding protein from burkholderia thailandensis
43% identity, 90% coverage of query (251 bits)
Build an alignment for GFF2161 and 8 homologs with ≥ 30% identity
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PS417_18405 D-ribose ABC transporter, substrate-binding component RbsB from Pseudomonas simiae WCS417
24% identity, 70% coverage of query (51.6 bits)
RALBP_PSEAE / Q9I2F8 D-ribose/D-allose-binding protein from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
26% identity, 81% coverage of query (48.1 bits)
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Lawrence Berkeley National Laboratory