Sites on a Tree

 

Searching for up to 100 curated homologs for GFF2216 FitnessBrowser__Marino:GFF2216 (594 a.a.)

Found high-coverage hits (≥70%) to 2 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Ac3H11_796 ABC transporter for Glycerol, periplasmic substrate-binding component from Acidovorax sp. GW101-3H11
    59% identity, 92% coverage of query (684 bits)

TC 3.A.1.1.35 / G3LHZ3 GlpV, component of Glycerol uptake porter, GlpSTPQV from Rhizobium leguminosarum bv. viciae
    56% identity, 92% coverage of query (647 bits)

Build an alignment

Build an alignment for GFF2216 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory