Searching for up to 100 curated homologs for GFF2268 FitnessBrowser__WCS417:GFF2268 (264 a.a.)
Found high-coverage hits (≥70%) to 26 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
PotC / b1124 spermidine preferential ABC transporter membrane subunit PotC (EC 7.6.2.11; EC 7.6.2.16) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
PotC / P0AFK6 spermidine preferential ABC transporter membrane subunit PotC (EC 7.6.2.11) from Escherichia coli (strain K12) (see 2 papers)
POTC_ECOLI / P0AFK6 Spermidine/putrescine transport system permease protein PotC from Escherichia coli (strain K12) (see paper)
TC 3.A.1.11.1 / P0AFK6 Spermidine/putrescine transport system permease protein PotC aka B1124, component of Polyamine (putrescine/spermidine) uptake porter from Escherichia coli (see 5 papers)
potC spermidine/putrescine ABC transporter, permease protein PotC from Escherichia coli K12 (see paper)
33% identity, 81% coverage of query (136 bits)
TC 3.A.1.11.6 / Q1M7Q2 Putative spermidine/putrescine transport system ABC transporter permease component, component of The γ-aminobutyrate (GABA) uptake system, GtsABCD from Rhizobium leguminosarum bv. viciae (strain 3841) (see paper)
31% identity, 81% coverage of query (119 bits)
Build an alignment for GFF2268 and 2 homologs with ≥ 30% identity
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TC 3.A.1.11.3 / Q44381 MotD, component of Mannopine porter from Agrobacterium tumefaciens (see paper)
29% identity, 92% coverage of query (112 bits)
PotI / b0857 putrescine ABC transporter membrane subunit PotI (EC 7.6.2.11; EC 7.6.2.16) from Escherichia coli K-12 substr. MG1655 (see 2 papers)
PotI / P0AFL1 putrescine ABC transporter membrane subunit PotI (EC 7.6.2.11) from Escherichia coli (strain K12) (see paper)
POTI_ECOLI / P0AFL1 Putrescine transport system permease protein PotI from Escherichia coli (strain K12) (see 3 papers)
TC 3.A.1.11.2 / P0AFL1 PotI aka B0857, component of Putrescine porter from Escherichia coli (see 5 papers)
32% identity, 89% coverage of query (97.1 bits)
TC 3.A.1.11.4 / O70071 ChtK, component of Chrysopine porter
30% identity, 91% coverage of query (90.9 bits)
TC 3.A.1.11.7 / Q97Q44 Spermidine/putrescine ABC transporter, permease protein, component of The spermidine/putrescine uptake porter, PotABCD from Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
29% identity, 86% coverage of query (88.6 bits)
PHNV_SALTY / P96065 Putative 2-aminoethylphosphonate transport system permease protein PhnV from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
TC 3.A.1.11.5 / P96065 PhnV aka STM0426, component of 2-aminoethyl phosphonate porter from Salmonella typhimurium (see 2 papers)
28% identity, 90% coverage of query (80.5 bits)
G7SFQ8 ABC-type polyamine transporter (subunit 2/4) (EC 7.6.2.11) from Streptococcus suis (see paper)
25% identity, 86% coverage of query (78.2 bits)
YdcV / b1443 putative ABC transporter membrane subunit YdcV from Escherichia coli K-12 substr. MG1655 (see 4 papers)
ydcV / P0AFR9 putative ABC transporter membrane subunit YdcV from Escherichia coli (strain K12) (see 4 papers)
YDCV_ECOLI / P0AFR9 Inner membrane ABC transporter permease protein YdcV from Escherichia coli (strain K12) (see 2 papers)
31% identity, 89% coverage of query (77.4 bits)
smoH / Q7CS31 ABC-type 3-(6-sulfo-α-D-quinovosyl)-sn-glycerol transporter permease subunit from Agrobacterium fabrum (strain C58 / ATCC 33970) (see paper)
28% identity, 82% coverage of query (77.0 bits)
Dshi_0549 ABC transporter for Xylitol, permease component 2 from Dinoroseobacter shibae DFL-12
28% identity, 74% coverage of query (76.3 bits)
CysU / b2424 sulfate/thiosulfate ABC transporter inner membrane subunit CysU (EC 7.3.2.3; EC 7.3.2.5) from Escherichia coli K-12 substr. MG1655 (see paper)
CysU / P16701 sulfate/thiosulfate ABC transporter inner membrane subunit CysU (EC 7.3.2.3; EC 7.3.2.5) from Escherichia coli (strain K12) (see paper)
CYST_ECOLI / P16701 Sulfate transport system permease protein CysT from Escherichia coli (strain K12) (see paper)
TC 3.A.1.6.1 / P16701 CysT aka CysU aka B2424, component of Sulfate/thiosulfate porter from Escherichia coli (see 6 papers)
27% identity, 72% coverage of query (73.6 bits)
ModB / b0764 molybdate ABC transporter membrane subunit (EC 7.3.2.5) from Escherichia coli K-12 substr. MG1655 (see 2 papers)
ModB / P0AF01 molybdate ABC transporter membrane subunit (EC 7.3.2.5) from Escherichia coli (strain K12) (see 2 papers)
TC 3.A.1.8.1 / P0AF01 Molybdenum transport system permease protein ModB aka CHLJ aka B0764, component of Molybdate porter consisting of three proteins from Escherichia coli (see 7 papers)
modB / ECOCYC|MODB-MONOMER molybdenum transport system permease protein modB from Escherichia coli K12 (see 8 papers)
30% identity, 76% coverage of query (72.4 bits)
modB / AAB60172.1 ModB from Escherichia coli (see 2 papers)
30% identity, 76% coverage of query (71.2 bits)
SM_b21105 ABC transporter for L-Fucose, permease component 2 from Sinorhizobium meliloti 1021
30% identity, 80% coverage of query (69.3 bits)
PHNU_SALTY / P96064 Putative 2-aminoethylphosphonate transport system permease protein PhnU from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
TC 3.A.1.11.5 / P96064 PhnU aka STM0427, component of 2-aminoethyl phosphonate porter from Salmonella typhimurium (see 2 papers)
26% identity, 78% coverage of query (68.6 bits)
TC 3.A.1.1.25 / Q72H66 Maltose transport system permease protein malG aka TT_C1629, component of The trehalose/maltose/sucrose/palatinose porter (TTC1627-9) plus MalK1 (ABC protein, shared with 3.A.1.1.24) (Silva et al. 2005; Chevance et al., 2006). The receptor (TTC1627) binds disaccharide alpha-glycosides, namely trehalose (alpha-1,1), sucrose (alpha-1,2), maltose (alpha-1,4), palatinose (alpha-1,6) and glucose from Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) (see paper)
27% identity, 74% coverage of query (68.6 bits)
DASC_STRCO / Q9K489 Diacetylchitobiose uptake system permease protein DasC from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) (see paper)
26% identity, 84% coverage of query (67.4 bits)
TC 3.A.1.20.1 / O54371 BitE, component of The iron transporter, BitABCDEF from Treponema hyodysenteriae (Serpulina hyodysenteriae) (see paper)
27% identity, 79% coverage of query (66.6 bits)
TC 3.A.1.10.3 / P71338 FbpB, component of Ferric iron (Fe3+) porter, FbpABC or HitABC (selective for trivalent cations, Fe3+, Ga3+ and Al3+) from Haemophilus influenzae (see 2 papers)
27% identity, 77% coverage of query (63.9 bits)
WTPB_ARCFU / O30143 Molybdate/tungstate transport system permease protein WtpB from Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) (see paper)
TC 3.A.1.6.8 / O30143 Molybdate/tungstate transport system permease protein WtpB, component of Molybdate/tungstate transport system, ModABC (WtpABC) (ModA binds to ModBC with high affinity (0.11%u03BCM) and dissociates slowly; the complex is destabilized by nucleotide and substrate binding from Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
26% identity, 80% coverage of query (63.5 bits)
PGA1_c27950 N-Acetyl-D-glucosamine ABC transport system, permease component 2 from Phaeobacter inhibens BS107
26% identity, 91% coverage of query (63.5 bits)
Q72FN2 ABC-type molybdate transporter (EC 7.3.2.5); ABC-type tungstate transporter (EC 7.3.2.6) from Desulfovibrio vulgaris (see paper)
29% identity, 73% coverage of query (62.0 bits)
Pf1N1B4_5114 sucrose ABC transporter, permease component 2 from Pseudomonas fluorescens FW300-N1B4
24% identity, 78% coverage of query (60.8 bits)
TC 3.A.1.1.24 / Q72KX4 Sugar transport system permease protein aka TT_C0326, component of The glucose/mannose porter TTC0326-8 plus MalK1 (ABC protein, shared with 3.A.1.1.25) from Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) (see paper)
26% identity, 97% coverage of query (59.7 bits)
TC 3.A.1.1.20 / Q7WWQ8 Transmembrane permease MsmG, component of The fructooligosaccharide porter, MsmEFGK from Lactobacillus acidophilus (see 2 papers)
msmG / GI|33149340 transmembrane permease MsmG from Lactobacillus acidophilus (see paper)
24% identity, 90% coverage of query (59.7 bits)
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Lawrence Berkeley National Laboratory