Searching for up to 100 curated homologs for GFF2270 FitnessBrowser__psRCH2:GFF2270 (162 a.a.)
Found high-coverage hits (≥70%) to 6 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
YiiV / b3929 ribonuclease E inhibitor protein A from Escherichia coli K-12 substr. MG1655 (see 20 papers)
RRAA_ECOLI / P0A8R0 Regulator of ribonuclease activity A from Escherichia coli (strain K12) (see 7 papers)
58% identity, 99% coverage of query (189 bits)
2yjvC / P0A8R0 Crystal structure of e. Coli regulator of ribonuclease activity a (rraa) bound to fragment of dead-box protein rhlb (see paper)
59% identity, 97% coverage of query (186 bits)
RRAAH_THET8 / Q5SIP7 4-hydroxy-4-methyl-2-oxoglutarate aldolase; HMG aldolase; Oxaloacetate decarboxylase; OAA decarboxylase; Regulator of ribonuclease activity homolog; EC 4.1.3.17; EC 4.1.1.112 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see paper)
45% identity, 98% coverage of query (144 bits)
1nxjA / P9WGY3 Structure of rv3853 from mycobacterium tuberculosis (see paper)
45% identity, 92% coverage of query (136 bits)
Build an alignment for GFF2270 and 4 homologs with ≥ 30% identity
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pmdF / Q93PS8 HMG aldolase monomer (EC 4.1.3.17) from Comamonas testosteroni (see paper)
24% identity, 83% coverage of query (51.6 bits)
proA / Q9AQI0 4-oxalocitramalate aldolase subunit (EC 4.1.1.112; EC 4.1.3.17) from Pseudomonas straminea (see 3 papers)
HMGA_PSEOC / Q9AQI0 4-hydroxy-4-methyl-2-oxoglutarate aldolase/4-carboxy-4-hydroxy-2-oxoadipate aldolase; HMG/CHA aldolase; 4-hydroxy-2-oxoglutarate aldolase; Oxaloacetate decarboxylase; OAA decarboxylase; EC 4.1.3.16; EC 4.1.3.17; EC 4.1.1.112 from Pseudomonas straminea (see 4 papers)
proA / BAB21456.3 4-Hydroxy-4-methyl-2-oxoglutarate aldolase from Pseudomonas straminea (see 2 papers)
24% identity, 83% coverage of query (51.6 bits)
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Lawrence Berkeley National Laboratory