Searching for up to 100 curated homologs for GFF2442 FitnessBrowser__Marino:GFF2442 (318 a.a.)
Found high-coverage hits (≥70%) to 41 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
wbpK / P72144 UDP-N-acetyl-α-D-fucosamine dehydrogenase from Pseudomonas aeruginosa (see 2 papers)
43% identity, 99% coverage of query (228 bits)
wbpV / Q9RHC9 UDP-N-acetyl-α-D-quinovosamine dehydrogenase (EC 1.1.1.426) from Pseudomonas aeruginosa (see paper)
38% identity, 99% coverage of query (195 bits)
ORF35x7 / CAA69124.1 ORF35x7 from Vibrio cholerae (see paper)
35% identity, 93% coverage of query (181 bits)
wreQ / Q6TP29 UDP-N-acetyl-α-D-quinovosamine dehydrogenase (EC 1.1.1.426) from Rhizobium etli (see 2 papers)
Q6TP29 UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase (EC 1.1.1.426) from Rhizobium etli (see paper)
37% identity, 96% coverage of query (179 bits)
wbiG / GI|3135686 putative epimerase/dehydratase WbiG from Burkholderia pseudomallei (see paper)
37% identity, 98% coverage of query (176 bits)
Build an alignment for GFF2442 and 5 homologs with ≥ 30% identity
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cpsG polysaccharide capsule synthesis protein CpsG from Streptococcus iniae (see paper)
26% identity, 83% coverage of query (94.4 bits)
gnu / Q8X7P7 N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol 4-epimerase (EC 5.1.3.26) from Escherichia coli O157:H7 (see 2 papers)
GNU_ECO57 / Q8X7P7 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol 4-epimerase; GlcNAc-P-P-Und 4-epimerase; EC 5.1.3.26 from Escherichia coli O157:H7 (see paper)
gne UDP-N-acetylglucosamine 4-epimerase; EC 5.1.3.7 from Escherichia coli O157:H7 (see paper)
26% identity, 86% coverage of query (80.9 bits)
6wj9B / Q4KCF6 Udp-glcnac c4-epimerase mutant s121a/y146f from pseudomonas protegens in complex with udp-glcnac (see paper)
30% identity, 77% coverage of query (78.6 bits)
6wjaA Udp-glcnac c4-epimerase mutant s121a/y146f from pseudomonas protegens in complex with udp-galnac
30% identity, 77% coverage of query (78.6 bits)
6dntA / D3E402 Udp-n-acetylglucosamine 4-epimerase from methanobrevibacter ruminantium m1 in complex with udp-n-acetylmuramic acid (see paper)
27% identity, 70% coverage of query (69.3 bits)
6kvcA Moee5 in complex with udp-glucose and NAD
33% identity, 75% coverage of query (68.6 bits)
6bwlA / Q3ESA4 X-ray structure of pal from bacillus thuringiensis (see paper)
26% identity, 93% coverage of query (67.0 bits)
6kv9A / A0A003 Moee5 in complex with udp-glucuronic acid and NAD (see paper)
33% identity, 75% coverage of query (67.0 bits)
O73960 UDP-glucose 4-epimerase (EC 5.1.3.2) from Pyrococcus horikoshii (see paper)
25% identity, 80% coverage of query (66.6 bits)
1z45A / P04397 Crystal structure of the gal10 fusion protein galactose mutarotase/udp-galactose 4-epimerase from saccharomyces cerevisiae complexed with NAD, udp-glucose, and galactose (see paper)
30% identity, 70% coverage of query (65.9 bits)
P04397 UDP-glucose 4-epimerase (EC 5.1.3.2) from Saccharomyces cerevisiae (see paper)
29% identity, 70% coverage of query (63.5 bits)
GALE_NEIGO / Q05026 UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Neisseria gonorrhoeae (see paper)
galE / CAA79721.1 UDP-glucose 4-epimerase from Neisseria gonorrhoeae (see 2 papers)
29% identity, 80% coverage of query (63.2 bits)
6zldA Crystal structure of udp-glucuronic acid 4-epimerase from bacillus cereus in complex with udp-glucuronic acid and NAD
25% identity, 79% coverage of query (62.8 bits)
6zl6A Crystal structure of udp-glucuronic acid 4-epimerase from bacillus cereus in complex with udp and NAD
25% identity, 79% coverage of query (62.8 bits)
GALE_NEIMC / P56986 UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Neisseria meningitidis serogroup C (see paper)
galE / AAA86716.1 UDP-glucose 4-epimerase from Neisseria meningitidis (see paper)
28% identity, 76% coverage of query (62.4 bits)
6zllA Crystal structure of udp-glucuronic acid 4-epimerase from bacillus cereus in complex with udp-galacturonic acid and NAD (see paper)
25% identity, 79% coverage of query (62.4 bits)
3aw9A / A3MUJ4 Structure of udp-galactose 4-epimerase mutant
29% identity, 80% coverage of query (62.0 bits)
A3MUJ4 UDP-glucose 4-epimerase (EC 5.1.3.2) from Pyrobaculum calidifontis (see paper)
30% identity, 80% coverage of query (61.2 bits)
6zljA Crystal structure of udp-glucuronic acid 4-epimerase y149f mutant from bacillus cereus in complex with udp-4-deoxy-4-fluoro-glucuronic acid and NAD
25% identity, 79% coverage of query (60.8 bits)
rmd / AAK53475.1 putative NDP-hexose epimerase/oxydoreductase from Xanthomonas campestris pv. campestris (see 4 papers)
31% identity, 76% coverage of query (60.5 bits)
GALE_NEIMB / P56985 UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Neisseria meningitidis serogroup B (strain MC58) (see paper)
galE1 / AAA65535.1 UDP-glucose 4-epimerase from Neisseria meningitidis (see paper)
28% identity, 76% coverage of query (60.5 bits)
galE / AAA63156.1 UPD-glucose-4-epimerase from Neisseria meningitidis (see paper)
28% identity, 81% coverage of query (59.3 bits)
6pnlA / O26475 Structure of epimerase mth375 from the thermophilic pseudomurein- containing methanogen methanothermobacter thermautotrophicus
26% identity, 98% coverage of query (59.3 bits)
6pmhA Structure of epimerase mth375 from the thermophilic pseudomurein- containing methanogen methanothermobacter thermautotrophicus
26% identity, 98% coverage of query (59.3 bits)
Q7MH46 UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) from Vibrio vulnificus (see paper)
24% identity, 81% coverage of query (58.9 bits)
bciA / Q8KDI7 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (NADPH) (EC 1.3.1.75) from Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) (see 5 papers)
Q8KDI7 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (NADPH) (EC 1.3.1.75) from Chlorobaculum tepidum (see 3 papers)
26% identity, 85% coverage of query (58.2 bits)
galE / P21977 UDP-glucose-4-epimerase (EC 5.1.3.2) from Streptococcus thermophilus (see paper)
GALE_STRTR / P21977 UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 from Streptococcus thermophilus (see paper)
P21977 UDP-glucose 4-epimerase (EC 5.1.3.2) from Streptococcus thermophilus (see paper)
24% identity, 93% coverage of query (57.8 bits)
rhsB / AAC44074.1 dTDP-D-glucose-4,6-dehydratase from Sphingomonas sp. S88 (see paper)
26% identity, 77% coverage of query (57.8 bits)
RHM2 / Q9LPG6 trifunctional UDP-glucose 4,6-dehydratase/UDP-4-dehydro-6-deoxy-D-glucose 3,5-epimerase/UDP-4-dehydro-L-rhamnose-reductase RHM2 (EC 4.2.1.76) from Arabidopsis thaliana (see 2 papers)
RHM2_ARATH / Q9LPG6 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2; NDP-rhamnose synthase; Protein MUCILAGE-MODIFIED 4; Protein RHAMNOSE BIOSYNTHESIS 2; Rhamnose biosynthetic enzyme 2; AtRHM2; UDP-L-rhamnose synthase MUM4; EC 4.2.1.76; EC 1.1.1.-; EC 5.1.3.- from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
24% identity, 92% coverage of query (57.4 bits)
8b9zP / Q9VPE2 Drosophila melanogaster complex i in the active state (dm1) (see paper)
22% identity, 78% coverage of query (55.5 bits)
5u4qA 1.5 angstrom resolution crystal structure of NAD-dependent epimerase from klebsiella pneumoniae in complex with NAD.
23% identity, 85% coverage of query (55.1 bits)
RHM1 / Q9SYM5 trifunctional UDP-glucose 4,6-dehydratase/UDP-4-dehydro-6-deoxy-D-glucose 3,5-epimerase/UDP-4-dehydro-L-rhamnose-reductase RHM1 (EC 4.2.1.76) from Arabidopsis thaliana (see 3 papers)
RHM1_ARATH / Q9SYM5 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1; Protein REPRESSOR OF LRX1 1; Rhamnose biosynthetic enzyme 1; AtRHM1; EC 4.2.1.76; EC 1.1.1.-; EC 5.1.3.- from Arabidopsis thaliana (Mouse-ear cress) (see 8 papers)
24% identity, 92% coverage of query (53.5 bits)
3enkA / Q3JPI3 1.9a crystal structure of udp-glucose 4-epimerase from burkholderia pseudomallei
27% identity, 82% coverage of query (52.0 bits)
DCVR_ORYSI / D5L1S4 Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic; EC 1.3.1.75 from Oryza sativa subsp. indica (Rice) (see 2 papers)
D5L1S4 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (NADPH) (EC 1.3.1.75) from Oryza sativa (see paper)
Q10LH0 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (NADPH) (EC 1.3.1.75) from Oryza sativa (see 2 papers)
27% identity, 85% coverage of query (48.5 bits)
2cnbA Trypanosoma brucei udp-galactose-4-epimerase in ternary complex with NAD and the substrate analogue udp-4-deoxy-4- fluoro-alpha-d-galactose
25% identity, 82% coverage of query (47.8 bits)
auaH / H1ZZB0 4-hydroxy-2-methyl-3-oxo-4-farnesyl-3,4-dihydroquinoline-1-oxide 3-reductase (EC 1.1.1.394) from Stigmatella aurantiaca (see 2 papers)
AUAH_STIAU / H1ZZB0 Aurachin B dehydrogenase; EC 1.1.1.394 from Stigmatella aurantiaca (see 2 papers)
H1ZZB0 aurachin B dehydrogenase (EC 1.1.1.394) from Stigmatella aurantiaca (see paper)
25% identity, 93% coverage of query (47.4 bits)
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Lawrence Berkeley National Laboratory