Searching for up to 100 curated homologs for GFF2463 PS417_12560 MFS transporter (430 a.a.)
Found high-coverage hits (≥70%) to 28 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
NICT_PSEPK / Q88FY6 Putative metabolite transport protein NicT; Nicotinate degradation protein T from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
30% identity, 97% coverage of query (167 bits)
Build an alignment for GFF2463 and 1 homologs with ≥ 30% identity
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ABAQ_ACIBT / P0DPR4 Quinolone resistance transporter from Acinetobacter baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377) (see 2 papers)
29% identity, 92% coverage of query (162 bits)
TC 2.A.1.14.8 / Q9RPP3 Phthalate porter from Burkholderia cepacia (Pseudomonas cepacia) (see paper)
27% identity, 93% coverage of query (160 bits)
PS417_07265 2-deoxy-D-ribonate transporter 1 from Pseudomonas simiae WCS417
29% identity, 87% coverage of query (159 bits)
BWI76_RS23715 2-deoxy-D-ribonate transporter 1 from Klebsiella michiganensis M5al
26% identity, 97% coverage of query (155 bits)
BPHYT_RS04765 2-deoxy-D-ribonate transporter from Burkholderia phytofirmans PsJN
27% identity, 92% coverage of query (137 bits)
H281DRAFT_00642 2-deoxy-D-ribonate transporter from Paraburkholderia bryophila 376MFSha3.1
27% identity, 93% coverage of query (134 bits)
YfaV / b2246 putative transporter YfaV from Escherichia coli K-12 substr. MG1655 (see 4 papers)
TC 2.A.1.14.35 / P76470 Inner membrane transport protein RhmT from Escherichia coli (strain K12) (see 4 papers)
28% identity, 84% coverage of query (127 bits)
CH_124132 transporter of Nicotinic Acid from Magnaporthe grisea 70-15 (see paper)
27% identity, 85% coverage of query (123 bits)
orf19.3232 putative transporter from Candida albicans (see paper)
26% identity, 95% coverage of query (120 bits)
CH_124318 MFS transporter from Magnaporthe grisea 70-15 (see 2 papers)
30% identity, 72% coverage of query (118 bits)
CH_124029 high-affinity nicotinic acid transporter from Magnaporthe grisea 70-15 (see paper)
27% identity, 72% coverage of query (111 bits)
YidT / b3691 D-galactonate:H+ symporter from Escherichia coli K-12 substr. MG1655 (see 9 papers)
dgoT / P0AA76 D-galactonate:H+ symporter from Escherichia coli (strain K12) (see 11 papers)
DGOT_ECOLI / P0AA76 D-galactonate transporter; D-galactonate/H(+) symporter from Escherichia coli (strain K12) (see 4 papers)
TC 2.A.1.14.7 / P0AA76 Galactonate transporter from Escherichia coli (see 4 papers)
25% identity, 90% coverage of query (110 bits)
6e9nA / J7QAK3 E. Coli d-galactonate:proton symporter in the inward open form (see paper)
25% identity, 90% coverage of query (109 bits)
SAUU_CUPNH / Q0K843 Probable sulfoacetate transporter SauU from Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) (Ralstonia eutropha) (see paper)
25% identity, 97% coverage of query (105 bits)
GUDP_BACSU / P42237 Probable galactarate/D-glucarate transporter GudP from Bacillus subtilis (strain 168) (see paper)
TC 2.A.1.14.1 / P42237 Glucarate porter from Bacillus subtilis (see 3 papers)
24% identity, 95% coverage of query (105 bits)
AO356_28540 D-mannose transporter from Pseudomonas fluorescens FW300-N2C3
24% identity, 95% coverage of query (100 bits)
PS417_04205 D-galacturonate transporter (MFS superfamily) from Pseudomonas simiae WCS417
25% identity, 89% coverage of query (99.0 bits)
TNA1 putative nicotinic acid transporter from Candida albicans (see paper)
27% identity, 72% coverage of query (97.8 bits)
6e9oA E. Coli d-galactonate:proton symporter mutant e133q in the outward substrate-bound form
24% identity, 90% coverage of query (94.7 bits)
CH_124319 high-affinity nicotinic acid transporter from Magnaporthe grisea 70-15 (see paper)
25% identity, 76% coverage of query (92.4 bits)
CH_124128 MFS transporter from Magnaporthe grisea 70-15 (see paper)
23% identity, 70% coverage of query (88.2 bits)
GudP / b2789 galactarate/D-glucarate transporter GudP from Escherichia coli K-12 substr. MG1655 (see 5 papers)
gudP / Q46916 galactarate/D-glucarate transporter GudP from Escherichia coli (strain K12) (see 5 papers)
GUDP_ECOLI / Q46916 Probable galactarate/D-glucarate transporter GudP from Escherichia coli (strain K12) (see 2 papers)
TC 2.A.1.14.40 / C4ZZU4 Glucarate transporter, GudP. Encoded in an operon with GudD, a glucarate dehydratase from Escherichia coli (strain K12 / MC4100 / BW2952)
24% identity, 89% coverage of query (85.9 bits)
LIZ1_SCHPO / O43000 Pantothenate transporter liz1 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see 2 papers)
TC 2.A.1.14.17 / O43000 Pantothenate:H+ symporter, Liz1 (mutants cause abnormal mitosis due to a defect in ribonucleotide reductase) from Schizosaccharomyces pombe (Fission yeast) (see 3 papers)
liz1 / RF|NP_596430.1 pantothenate transporter liz1 from Schizosaccharomyces pombe (see 4 papers)
26% identity, 82% coverage of query (84.3 bits)
TC 2.A.1.14.14 / Q8FDB7 Probable D-galactarate (glucarate?):H+ symporter, GarP or YhaU from Escherichia coli O6 (see paper)
22% identity, 95% coverage of query (75.9 bits)
GarP / b3127 galactarate/D-glucarate transporter GarP from Escherichia coli K-12 substr. MG1655 (see 6 papers)
garP / P0AA80 galactarate/D-glucarate transporter GarP from Escherichia coli (strain K12) (see 5 papers)
GARP_ECOLI / P0AA80 Probable galactarate/D-glucarate transporter GarP from Escherichia coli (strain K12) (see 2 papers)
22% identity, 95% coverage of query (75.9 bits)
P53322 High-affinity nicotinic acid transporter; Nicotinic acid permease from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
21% identity, 72% coverage of query (68.6 bits)
PCAK_PSEPU / Q51955 4-hydroxybenzoate transporter PcaK from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 3 papers)
TC 2.A.1.15.1 / Q51955 4-Hydroxybenzoate/protocatechuate porter from Pseudomonas putida (see paper)
pcaK / AAA85137.1 PcaK from Pseudomonas putida (see paper)
23% identity, 77% coverage of query (57.8 bits)
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Lawrence Berkeley National Laboratory