Searching for up to 100 curated homologs for GFF2518 FitnessBrowser__Phaeo:GFF2518 (320 a.a.)

Found high-coverage hits (≥70%) to 7 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

7yleA / A3SME7 Rndmpx in complex with dmsp (see paper)
    65% identity, 93% coverage of query (417 bits)

TC 3.A.1.12.6 / Q9KKE3 HutX aka HISX, component of Uptake system for hisitidine, proline, proline-betaine and glycine-betaine from Rhizobium meliloti (Sinorhizobium meliloti) (see paper)
    32% identity, 93% coverage of query (159 bits)

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Build an alignment for GFF2518 and 2 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

AO356_09620 ABC transporter for L-Histidine, periplasmic substrate-binding component from Pseudomonas fluorescens FW300-N2C3
    25% identity, 99% coverage of query (110 bits)

4xz6A / Q5LT66 Tmox in complex with tmao (see paper)
    23% identity, 88% coverage of query (61.6 bits)

TMOX_RUEPO / Q5LT66 Trimethylamine N-oxide-binding protein; TMAO-binding protein from Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi) (see 2 papers)
    23% identity, 88% coverage of query (61.2 bits)

TC 3.A.1.12.12 / Q9HTH6 Putative uncharacterized protein, component of The CbcWV/CbcX (choline)/CaiX (carnitine)/BetX (betaine) transporter with 3 binding receptors for distinct quaternary ammonium compounds. Only the ligand-bound receptor binds to the transporter with high affinity from Pseudomonas aeruginosa (see paper)
    25% identity, 95% coverage of query (48.1 bits)

TMOX_PELUB / Q4FL33 Trimethylamine N-oxide-binding protein; TMAO-binding protein from Pelagibacter ubique (strain HTCC1062) (see paper)
    23% identity, 95% coverage of query (47.4 bits)

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