Sites on a Tree

 

Searching for up to 100 curated homologs for GFF2709 FitnessBrowser__psRCH2:GFF2709 (2843 a.a.)

Found high-coverage hits (≥70%) to 3 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

ACD71661.1 cyclic β-1,2-glucan synthetase (Cgs) (EC 2.4.1.-|2.4.1.-) (see protein)
    45% identity, 99% coverage of query (2427 bits)

NDVB_RHIME / P20471 Cyclic beta-(1,2)-glucan synthase NdvB; EC 2.4.1.- from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) (see 2 papers)
ndvB protein NdvB from Sinorhizobium meliloti (see paper)
    45% identity, 97% coverage of query (2320 bits)

AAK73356.1 cyclic β-1,2-glucan synthetase (ChvB) (EC 2.4.1.-|2.4.1.-|2.4.1.-) (see protein)
    45% identity, 96% coverage of query (2285 bits)

Build an alignment

Build an alignment for GFF2709 and 3 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory