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Searching for up to 100 curated homologs for GFF2749 FitnessBrowser__Marino:GFF2749 (506 a.a.)

Found high-coverage hits (≥70%) to 4 curated proteins.

Removed hits that are identical to the query, leaving 3

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

YdbU / b1395 3-hydroxyadipyl-CoA dehydrogenase (EC 1.1.1.35) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
paaH / P76083 3-hydroxyadipyl-CoA dehydrogenase (EC 1.1.1.35) from Escherichia coli (strain K12) (see 3 papers)
PAAH_ECOLI / P76083 3-hydroxyadipyl-CoA dehydrogenase; EC 1.1.1.- from Escherichia coli (strain K12) (see 4 papers)
    44% identity, 99% coverage of query (398 bits)

paaH2 / Q0KCM8 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) from Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) (see paper)
    37% identity, 97% coverage of query (302 bits)

dcaH / AAL09091.1 DcaH from Acinetobacter baylyi (see 11 papers)
    36% identity, 96% coverage of query (296 bits)

Build an alignment

Build an alignment for GFF2749 and 3 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory