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Searching for up to 100 curated homologs for GFF2909 FitnessBrowser__Marino:GFF2909 (480 a.a.)

Found high-coverage hits (≥70%) to 36 curated proteins.

Removed hits that are identical to the query, leaving 35

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

7xdqA / E4PMA5 Crystal structure of a glucosylglycerol phosphorylase mutant from marinobacter adhaerens
    96% identity, 100% coverage of query (936 bits)

spp / D9TT09 sucrose 6F-phosphate phosphorylase (EC 2.4.1.329) from Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIMB 9385 / NCA 3814 / NCTC 13789 / WDCM 00135 / 2032) (see paper)
SUCPP_THETC / D9TT09 Sucrose 6(F)-phosphate phosphorylase; Sucrose 6'-phosphate phosphorylase; SPP; EC 2.4.1.329 from Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIMB 9385 / NCA 3814 / NCTC 13789 / WDCM 00135 / 2032) (Clostridium thermosaccharolyticum) (see 3 papers)
D9TT09 sucrose 6F-phosphate phosphorylase (EC 2.4.1.329) from Thermoanaerobacterium thermosaccharolyticum (see paper)
ADL69407.1 6?-P-sucrose phosphorylase (SPP;TtSPP;Tthe_1921) (EC 2.4.1.-) (see protein)
    42% identity, 100% coverage of query (404 bits)

A0A1Y3Q6Q6 sucrose phosphorylase (EC 2.4.1.7) from Thermobacillus sp. ZCTH02-B1 (see paper)
    44% identity, 99% coverage of query (395 bits)

AAO21868.1 sucrose phosphorylase (LaSP;GtfA2;LBA1437) (EC 2.4.1.7) (see protein)
    41% identity, 96% coverage of query (383 bits)

M9ZS93 sucrose phosphorylase (EC 2.4.1.7) from Limosilactobacillus reuteri (see paper)
AGK37834.1 sucrose phosphorylase (ScrP) (EC 2.4.1.7) (see protein)
    42% identity, 89% coverage of query (369 bits)

SUCP_STRMU / P10249 Sucrose phosphorylase; Glucosyltransferase-A; GTF-A; Sucrose glucosyltransferase; EC 2.4.1.7 from Streptococcus mutans serotype c (strain ATCC 700610 / UA159) (see paper)
AAN58596.1 sucrose phosphorylase (GtfA;SMU.881) (EC 2.4.1.7) (see protein)
gtfA sucrose phosphorylase; EC 2.4.1.7 from Streptococcus mutans (see 4 papers)
    40% identity, 98% coverage of query (369 bits)

Q59495 sucrose phosphorylase (EC 2.4.1.7) from Leuconostoc mesenteroides (see paper)
BAA14344.1 sucrose phosphorylase (LmSPase) (EC 2.4.1.7) (see protein)
    40% identity, 99% coverage of query (366 bits)

2207198A sucrose phosphorylase (EC 2.4.1.7) (see protein)
    42% identity, 89% coverage of query (365 bits)

B8Y3Y0 sucrose phosphorylase (EC 2.4.1.7) from uncultured bacterium (see paper)
    39% identity, 98% coverage of query (363 bits)

AAX33736.1 sucrose phosphorylase (LmSP1) (EC 2.4.1.7) (see protein)
    40% identity, 97% coverage of query (363 bits)

CAA30846.1 sucrose phosphorylase (GftA;SmSP) (EC 2.4.1.7) (see protein)
    40% identity, 96% coverage of query (361 bits)

CAA80424.1 sucrose phosphorylase (EC 2.4.1.7) (see protein)
    41% identity, 97% coverage of query (361 bits)

ABS59292.1 sucrose phosphorylase (742sp) (EC 2.4.1.7) (see protein)
    41% identity, 89% coverage of query (360 bits)

scrP / GI|22550283 sucrose phosphorylase; EC 2.4.1.7 from Bifidobacterium animalis subsp. lactis (see paper)
    40% identity, 92% coverage of query (341 bits)

7znpA / A0A1J0SGS2 Structure of amedsp
    40% identity, 99% coverage of query (340 bits)

scrP / Q84BY1 sucrose phosphorylase (EC 2.4.1.7) from Bifidobacterium longum (see paper)
AAO84039.1 sucrose phosphorylase (SplP) (EC 2.4.1.7) (see protein)
    38% identity, 93% coverage of query (337 bits)

A5A8M5 sucrose phosphorylase (EC 2.4.1.7) from Bifidobacterium longum (see paper)
BAF62433.1 sucrose phosphorylase (Spl) (EC 2.4.1.7) (see protein)
    38% identity, 93% coverage of query (334 bits)

AAD40317.1 sucrose phosphorylase (EC 2.4.1.7) (see protein)
    38% identity, 96% coverage of query (333 bits)

AAN24362.1 sucrose phosphorylase (Spl;BL0536) (EC 2.4.1.7) (see protein)
    38% identity, 93% coverage of query (331 bits)

SUCP_BIFAA / A0ZZH6 Sucrose phosphorylase; SP; SPase; EC 2.4.1.7 from Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) (see 3 papers)
AAO33821.1 sucrose phosphorylase (SucP;SP;BaSP) (EC 2.4.1.7) (see protein)
    38% identity, 93% coverage of query (317 bits)

2gduA E232q mutant of sucrose phosphorylase from bifidobacterium adolescentis in complex with sucrose
    38% identity, 93% coverage of query (315 bits)

5c8bB / A0ZZH6 Structural insights into the redesign of a sucrose phosphorylase by induced loop repositioning (see paper)
    38% identity, 93% coverage of query (313 bits)

5m9xB Structure of sucrose phosphorylase from bifidobacterium adolescentis bound to glycosylated resveratrol
    38% identity, 93% coverage of query (311 bits)

G4T4R6 sucrose 6F-phosphate phosphorylase (EC 2.4.1.329) from [Ruminococcus] gnavus (see paper)
    32% identity, 97% coverage of query (239 bits)

SUCPP_ILUCY / A0A6C7EEG6 Sucrose 6(F)-phosphate phosphorylase; SPP; Sucrose 6'-phosphate phosphorylase; EC 2.4.1.329 from Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) (see paper)
A0A6C7EEG6 sucrose 6F-phosphate phosphorylase (EC 2.4.1.329) from Ilumatobacter coccineus (see paper)
    30% identity, 97% coverage of query (218 bits)

6s9uA Crystal structure of sucrose 6f-phosphate phosphorylase from ilumatobacter coccineus (see paper)
    30% identity, 97% coverage of query (218 bits)

GGAP_ALLS1 / D7BAR0 Glucosylglycerate phosphorylase; GGa phosphorylase; GGaP; EC 2.4.1.352 from Allomeiothermus silvanus (strain ATCC 700542 / DSM 9946 / NBRC 106475 / NCIMB 13440 / VI-R2) (Thermus silvanus) (see paper)
D7BAR0 glucosylglycerate phosphorylase (EC 2.4.1.352) from Meiothermus silvanus (see paper)
    30% identity, 87% coverage of query (174 bits)

GGAP_SPITZ / G0GBS4 Glucosylglycerate phosphorylase; GGa phosphorylase; GGaP; EC 2.4.1.352 from Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) (see paper)
    30% identity, 88% coverage of query (173 bits)

Build an alignment

Build an alignment for GFF2909 and 28 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Additional hits (identity < 30%)

GgaP / b1309 glucosylglycerate phosphorylase (EC 2.4.1.352) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
ycjM / P76041 glucosylglycerate phosphorylase (EC 2.4.1.352) from Escherichia coli (strain K12) (see 4 papers)
GGAP_ECOLI / P76041 Glucosylglycerate phosphorylase; GGa phosphorylase; GGaP; EC 2.4.1.352 from Escherichia coli (strain K12) (see 2 papers)
P76041 glucosylglycerate phosphorylase (EC 2.4.1.352) from Escherichia coli (see paper)
AAC74391.2 sucrose phosphorylase (YcjM) (EC 2.4.1.7) (see protein)
    28% identity, 96% coverage of query (156 bits)

ams / G4T024 sucrose β-fructofuranosidase (EC 3.2.1.26; EC 2.4.1.4) from Methylotuvimicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) (see 4 papers)
G4T024 amylosucrase (EC 2.4.1.4) from Methylotuvimicrobium alcaliphilum (see 3 papers)
    25% identity, 82% coverage of query (75.1 bits)

B1XIU7 amylosucrase (EC 2.4.1.4) from Synechococcus sp. (see paper)
ACA98889.1 amylosucrase (AmsA;1986-orf;AMS;SYNPCC7002_A0885) (EC 2.4.1.4) (see protein)
    24% identity, 88% coverage of query (73.9 bits)

5x7uA / D1CE96 Trehalose synthase from thermobaculum terrenum (see paper)
    25% identity, 86% coverage of query (72.0 bits)

D1CE96 maltose alpha-D-glucosyltransferase (EC 5.4.99.16) from Thermobaculum terrenum (see 4 papers)
    25% identity, 86% coverage of query (71.2 bits)

I3NX86 maltose alpha-D-glucosyltransferase (EC 5.4.99.16) from Deinococcus radiodurans (see 4 papers)
    24% identity, 73% coverage of query (66.6 bits)

Q9RST7 maltose alpha-D-glucosyltransferase (EC 5.4.99.16) from Deinococcus radiodurans (see 2 papers)
    24% identity, 73% coverage of query (66.2 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory