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Searching for up to 100 curated homologs for GFF3397 FitnessBrowser__Marino:GFF3397 (566 a.a.)

Found high-coverage hits (≥70%) to 5 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

3u33A / P33224 Crystal structure of the e. Coli adaptive response protein aidb in the space group p3(2) (see paper)
    46% identity, 92% coverage of query (453 bits)

AidB / b4187 putative acyl-CoA dehydrogenase AidB (EC 1.3.8.4) from Escherichia coli K-12 substr. MG1655 (see 6 papers)
AidB / P33224 isovaleryl-CoA dehydrogenase and DNA-binding transcriptional repressor (EC 1.3.8.4) from Escherichia coli (strain K12) (see 13 papers)
AIDB_ECOLI / P33224 Putative acyl-CoA dehydrogenase AidB; EC 1.3.99.- from Escherichia coli (strain K12) (see 4 papers)
    46% identity, 92% coverage of query (453 bits)

5ez3B / Q8YC61 Crystal structure acyl-coa dehydrogenase from brucella melitensis in complex with fad
    45% identity, 96% coverage of query (439 bits)

Build an alignment

Build an alignment for GFF3397 and 3 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

ACD11_CAEEL / Q9XWZ2 Acyl-CoA dehydrogenase family member 11; EC 1.3.99.- from Caenorhabditis elegans (see paper)
    29% identity, 84% coverage of query (184 bits)

4y9jB / Q9XWZ2 Crystal structure of caenorhabditis elegans acdh-11 in complex with c11-coa (see paper)
    29% identity, 84% coverage of query (184 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory