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Searching for up to 100 curated homologs for GFF3447 FitnessBrowser__psRCH2:GFF3447 (327 a.a.)

Found high-coverage hits (≥70%) to 6 curated proteins.

Removed hits that are identical to the query, leaving 5

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

SO1670 fumarylacetoacetate hydrolase (EC 3.7.1.2) from Shewanella oneidensis MR-1
    70% identity, 99% coverage of query (482 bits)

3lzkC / Q92LT4 The crystal structure of a probably aromatic amino acid degradation protein from sinorhizobium meliloti 1021
    65% identity, 99% coverage of query (424 bits)

Build an alignment

Build an alignment for GFF3447 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

YISK_BACSU / O06724 Uncharacterized protein YisK from Bacillus subtilis (strain 168) (see paper)
    25% identity, 78% coverage of query (63.2 bits)

8skyB / A0A0D6X359 Crystal structure of yisk from bacillus subtilis in complex with oxalate (see paper)
    25% identity, 78% coverage of query (63.2 bits)

8sutA Crystal structure of yisk from bacillus subtilis in complex with reaction product 4-hydroxy-2-oxoglutaric acid
    25% identity, 78% coverage of query (63.2 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory