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Searching for up to 100 curated homologs for GFF3561 FitnessBrowser__Phaeo:GFF3561 (384 a.a.)

Found high-coverage hits (≥70%) to 12 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

SERC_METBF / P52878 Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Methanosarcina barkeri (strain Fusaro / DSM 804) (see paper)
P52878 phosphoserine transaminase (EC 2.6.1.52) from Methanosarcina barkeri (see paper)
    61% identity, 96% coverage of query (468 bits)

serC / Q8TNI1 phosphoserine aminotransferase monomer (EC 2.6.1.52; EC 2.6.1.1) from Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) (see 2 papers)
    61% identity, 96% coverage of query (463 bits)

Build an alignment

Build an alignment for GFF3561 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

2fyfA / P9WQ73 Structure of a putative phosphoserine aminotransferase from mycobacterium tuberculosis (see paper)
    27% identity, 96% coverage of query (92.4 bits)

SERC_MYCTU / P9WQ73 Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
P9WQ73 phosphoserine transaminase (EC 2.6.1.52) from Mycobacterium tuberculosis (see paper)
    28% identity, 96% coverage of query (92.4 bits)

8a5vE / Q9Y617 Crystal structure of the human phosposerine aminotransferase (psat) (see paper)
    20% identity, 89% coverage of query (57.8 bits)

PSAT1 / Q9Y617 Phosphoserine aminotransferase (EC 2.6.1.52) from Homo sapiens (see 2 papers)
SERC_HUMAN / Q9Y617 Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Homo sapiens (Human) (see 7 papers)
Q9Y617 glycine transaminase (EC 2.6.1.4); phosphoserine transaminase (EC 2.6.1.52) from Homo sapiens (see 5 papers)
    20% identity, 89% coverage of query (57.8 bits)

8a5wC Crystal structure of the human phosphoserine aminotransferase (psat) in complex with o-phosphoserine
    20% identity, 89% coverage of query (57.4 bits)

8a5wA Crystal structure of the human phosphoserine aminotransferase (psat) in complex with o-phosphoserine
    20% identity, 89% coverage of query (57.4 bits)

8a5vA Crystal structure of the human phosposerine aminotransferase (psat)
    20% identity, 89% coverage of query (57.4 bits)

3e77A Human phosphoserine aminotransferase in complex with plp
    20% identity, 89% coverage of query (56.2 bits)

8a5wE Crystal structure of the human phosphoserine aminotransferase (psat) in complex with o-phosphoserine
    20% identity, 89% coverage of query (55.8 bits)

Q2F5M8 phosphoserine transaminase (EC 2.6.1.52) from Bombyx mori (see paper)
    21% identity, 89% coverage of query (45.8 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory