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Searching for up to 100 curated homologs for GFF3629 FitnessBrowser__Phaeo:GFF3629 (332 a.a.)

Found high-coverage hits (≥70%) to 100 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

DppD / b3541 dipeptide ABC transporter ATP binding subunit DppD (EC 7.4.2.9) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
dppD / P0AAG0 dipeptide ABC transporter ATP binding subunit DppD (EC 7.4.2.9) from Escherichia coli (strain K12) (see 4 papers)
DPPD_ECOLI / P0AAG0 Dipeptide transport ATP-binding protein DppD; EC 7.4.2.9 from Escherichia coli (strain K12) (see 3 papers)
dppD / RF|NP_417998 dipeptide transport ATP-binding protein dppD from Escherichia coli K12 (see paper)
    50% identity, 95% coverage of query (319 bits)

TC 3.A.1.5.37 / B1W1L9 Putative peptide ABC transporter ATP-binding protein, component of The ABC BldKA-E (SGR_2418-2414) oligopeptide transport system. It controls aerial mycelium formation on glucose media. Probably involved in extracellular peptide signalling (Akanuma et al. 2011).  Probably orthologous to 3.A.1.5.35 from Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350)
    47% identity, 98% coverage of query (318 bits)

TC 3.A.1.5.1 / P04285 OppD aka STM1743, component of Oligopeptide porter (also takes up amino glycoside antibiotics such as kanamycin, streptomycin and neomycin as well as cell wall-derived peptides such as murein tripeptide). It transports substrate peptides of 2-5 amino acids with highest affinity for tripeptides. Also transports δ-aminolevulinic acid (ALA). [May be regulated by PTS Enzyme INtr-aspartokinase.] ATP-binding to OppDF may result in donation of peptide to OppBC and simultaneous release of OppA from Salmonella typhimurium (see 3 papers)
    49% identity, 98% coverage of query (317 bits)

OppD / b1246 murein tripeptide ABC transporter / oligopeptide ABC transporter ATP binding subunit OppD (EC 7.4.2.6) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
oppD / P76027 murein tripeptide ABC transporter / oligopeptide ABC transporter ATP binding subunit OppD (EC 7.4.2.6) from Escherichia coli (strain K12) (see 2 papers)
TC 3.A.1.5.41 / P76027 Oligopeptide transport ATP-binding protein OppD, component of Oligopeptide transporter, OppABCDF/MppA/YgiS from Escherichia coli (strain K12)
oppD oligopeptide ABC transporter, ATP-binding protein OppD from Escherichia coli K12 (see paper)
    48% identity, 97% coverage of query (315 bits)

Q5V9R9 ABC-type oligopeptide transporter (EC 7.4.2.6) from Vibrio fluvialis (see paper)
TC 3.A.1.5.22 / Q5V9R9 OppD, component of The peptide transporter OppA,B,C,D,F (influences biofilm formation; Lee et al., 2004). Similar to 3.A.1.5.1, OppA is similar to the Vibrio furnissii OppA that provides several functions: hemolysis, antibiotic resistance, and virulence from Vibrio fluvialis (see paper)
    47% identity, 95% coverage of query (313 bits)

TC 3.A.1.5.36 / Q93IU0 BldKD, putative ABC transporter intracellular ATPase subunit, component of Peptide transporter encoded adjacent to the putative transport system with TC#3.A.1.5.35 (Akanuma et al. 2011). Induced by exogenous S-adenosylmethionine (SAM) at a concentration of 2muM which also enhanced antibiotic production and inhibited morphological development (Park et al. 2005). SAM can be imported into cells. Mutants in the bldK genes confer resistance to the toxic tripeptide, bialaphos from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
    50% identity, 94% coverage of query (311 bits)

TC 3.A.1.5.20 / P42064 AppD, component of 5-6 amino acyl oligopeptide transporter AppA-F from Bacillus subtilis (see 2 papers)
    48% identity, 94% coverage of query (310 bits)

TC 3.A.1.5.15 / Q9X271 TM1749, component of Probable mannose/mannoside porter. Induced by beta-mannan (Conners et al., 2005). Regulated by mannose-responsive regulator manR (see paper)
    48% identity, 94% coverage of query (309 bits)

OPPD_BACSU / P24136 Oligopeptide transport ATP-binding protein OppD; Stage 0 sporulation protein KD from Bacillus subtilis (strain 168) (see paper)
    49% identity, 92% coverage of query (306 bits)

DPPD_LACLM / A2RI77 Dipeptide transport ATP-binding protein DppD; EC 7.4.2.9 from Lactococcus lactis subsp. cremoris (strain MG1363) (see paper)
    46% identity, 95% coverage of query (302 bits)

TC 3.A.1.5.27 / P45095 Dipeptide transport ATP-binding protein DppD, component of The glutathione uptake porter, DppBCDF with the glutathione binding protein, DppA (GbpA; HbpA). Takes up reduced (GSH) and oxidized (GSSG) but not bulky glutathione S conjugates or glutathione derivatives with C-terminal modifications from Haemophilus influenzae (see 2 papers)
    49% identity, 95% coverage of query (302 bits)

TC 3.A.1.5.2 / P26905 DppD aka DCIAD, component of Dipeptide porter. Also transports δ-aminolevulinic acid (ALA) and heme from Bacillus subtilis (see 2 papers)
    49% identity, 95% coverage of query (301 bits)

TC 3.A.1.5.25 / Q9CIK9 Oligopeptide ABC trasporter ATP binding protein, component of The ABC peptide/signalling peptide transporter. OptA binds peptides of 3-6 aas; OptS binds dipeptides. OptB,C,D are most similar to 3.A.1.5.19 from Lactococcus lactis subsp. lactis (see paper)
    46% identity, 95% coverage of query (300 bits)

DPPD_PSEAB / A0A0H2ZGN6 Di/tripeptide transport ATP-binding protein DppD; EC 7.4.2.9 from Pseudomonas aeruginosa (strain UCBPP-PA14) (see paper)
TC 3.A.1.5.39 / W0WJ90 Dipeptide transport ATP-binding protein DppD, component of Di- and tri-peptide transporter, DppBCDF with periplasmic substrate binding receptors, A1, A3, A5, A7 and A9, each with differing specificities for peptides from Pseudomonas aeruginosa MH38
    50% identity, 98% coverage of query (300 bits)

TC 3.A.1.5.19 / Q2FZR5 OppD, component of The major oligopeptide uptake porter, Opp-3 (of four paralogues, this is the only one that mediates nitrogen nutrition from Staphylococcus aureus (strain NCTC 8325)
    47% identity, 93% coverage of query (289 bits)

TC 3.A.1.5.26 / P63395 Uncharacterized ABC transporter ATP-binding protein Rv1281c/MT1318, component of The glutathione transporter, OppA (Dasgupta et al., 2010). OppA binds glutathione and the nanopeptide, bradykinin. Also regulates cytokine release, apoptosis and the innate immune response of macrophages infected with M. tuberculosis from Mycobacterium tuberculosis (see 2 papers)
    47% identity, 95% coverage of query (283 bits)

8j5qD / P9WQJ5 Cryo-em structure of mycobacterium tuberculosis oppabcd in the pre- translocation state (see paper)
    47% identity, 95% coverage of query (283 bits)

8j5tD Cryo-em structure of mycobacterium tuberculosis oppabcd in the catalytic intermediate state
    46% identity, 95% coverage of query (282 bits)

8j5sD Cryo-em structure of mycobacterium tuberculosis oppabcd in the pre- catalytic intermediate state
    46% identity, 95% coverage of query (282 bits)

DdpD / b1484 putative D,D-dipeptide ABC transporter ATP-binding subunit DdpD from Escherichia coli K-12 substr. MG1655 (see paper)
DDPD_ECOLI / P77268 Probable D,D-dipeptide transport ATP-binding protein DdpD from Escherichia coli (strain K12) (see paper)
    45% identity, 96% coverage of query (276 bits)

TC 3.A.1.5.12 / Q9X0F4 TM1064, component of Probable rhamnose oligosaccharide porter. Induced by rhamnose (see paper)
    44% identity, 94% coverage of query (275 bits)

TC 3.A.1.5.32 / F0TFT0 Oligopeptide ABC transporter, component of ABC α-galactoside uptake porter from Lactobacillus acidophilus (strain 30SC)
    42% identity, 95% coverage of query (275 bits)

TC 3.A.1.5.29 / Q9WXR4 Oligopeptide ABC transporter, ATP-binding protein, component of Probable xylan oligosaccharide porter (Conners et al. 2005). Induced by cylan and xylose. Regulated by xylose-responsive regulator XylR from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
    45% identity, 95% coverage of query (273 bits)

TC 3.A.1.5.18 / O31309 OppD, component of The oligopeptide transporter OppA1-5, B1, C1, DF (functions with five binding proteins of differing induction properties and peptide specificities; OppA1-3 are chromosomally encoded; OppA4 and 5 are plasmid encoded.) from Borrelia burgdorferi (Lyme disease spirochete) (see 2 papers)
    48% identity, 83% coverage of query (270 bits)

TC 3.A.1.5.10 / Q07733 OppD, component of Oligopeptide porter (transports peptides of 4-35) amino acyl residues; di- and tripeptides are not transported; hydrophobic basic peptides are preferred). OppA determines the specificity of the system (Doeven et al., 2004). A large cavity in OppA binds proline-rich peptides preferentially (Berntsson et al., 2009). Two crystal structures of OppA with different nonapeptides show binding in different registers from Lactococcus lactis subsp. lactis (Streptococcus lactis) (see 2 papers)
    46% identity, 84% coverage of query (267 bits)

SM_b21644 ABC transporter for D-Raffinose, ATPase component from Sinorhizobium meliloti 1021
    50% identity, 79% coverage of query (264 bits)

GsiA / b0829 glutathione ABC transporter ATP binding subunit GsiA (EC 7.4.2.10) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
gsiA / P75796 glutathione ABC transporter ATP binding subunit GsiA (EC 7.4.2.10) from Escherichia coli (strain K12) (see 3 papers)
GSIA_ECOLI / P75796 Glutathione import ATP-binding protein GsiA; EC 7.4.2.10 from Escherichia coli (strain K12) (see paper)
P75796 ABC-type glutathione transporter (EC 7.4.2.10) from Escherichia coli (see paper)
TC 3.A.1.5.11 / P75796 Hypothetical ABC transporter ATP-binding protein yliA, component of Glutathione porter, YliABCD or GsiABCD from Escherichia coli (see 4 papers)
    51% identity, 80% coverage of query (258 bits)

Q8ZQM4 ABC-type glutathione transporter (EC 7.4.2.10) from Salmonella enterica subsp. enterica serovar Typhimurium (see paper)
    52% identity, 78% coverage of query (257 bits)

A0A150QXP6 5-(carboxyamino)imidazole ribonucleotide mutase (EC 5.4.99.18) from Bacillus anthracis (see paper)
    42% identity, 94% coverage of query (254 bits)

TC 3.A.1.5.24 / Q8ZNJ8 YejF, component of The antimicrobial peptide (protamine, melittin, polymyxin B, human defensin (HBD)-1 and HBD-2 exporter, YejABEF (Eswarappa et al., 2008). Prefers N-formyl methionine peptides, such as Microcin C (of prokaryotic origin) to non formylated peptides (of eukaryotic origin) from Salmonella typhimurium (see paper)
    51% identity, 78% coverage of query (248 bits)

TC 3.A.1.5.15 / Q9X272 TM1750, component of Probable mannose/mannoside porter. Induced by beta-mannan (Conners et al., 2005). Regulated by mannose-responsive regulator manR (see paper)
    40% identity, 95% coverage of query (247 bits)

YejF / b2180 putative oligopeptide ABC transporter ATP binding subunit YejF (EC 7.4.2.6) from Escherichia coli K-12 substr. MG1655 (see 6 papers)
YejF / P33916 putative oligopeptide ABC transporter ATP binding subunit YejF (EC 7.4.2.6) from Escherichia coli (strain K12) (see 3 papers)
TC 3.A.1.5.21 / P33916 YejF, component of The Microcin C/peptide uptake porter, YejABEF from Escherichia coli (strain K12) (see 3 papers)
yejF / RF|NP_416685 uncharacterized ABC transporter ATP-binding protein yejF from Escherichia coli K12 (see paper)
    51% identity, 78% coverage of query (245 bits)

Q73NS7 ABC-type dipeptide transporter (EC 7.4.2.9) from Treponema denticola (see paper)
    41% identity, 96% coverage of query (241 bits)

TC 3.A.1.5.23 / Q9F9T4 EppD, component of The Ethylene diamine tetraacetate (EDTA) uptake porter, EppABCD (see 2 papers)
    46% identity, 81% coverage of query (237 bits)

SapD / b1291 putrescine ABC exporter ATP binding protein SapD (EC 7.6.2.16) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
SapD / P0AAH4 putrescine ABC exporter ATP binding protein SapD (EC 7.6.2.16) from Escherichia coli (strain K12) (see 5 papers)
SAPD_ECOLI / P0AAH4 Putrescine export system ATP-binding protein SapD from Escherichia coli (strain K12) (see 2 papers)
    41% identity, 89% coverage of query (233 bits)

TC 3.A.1.5.4 / O30541 AccB, component of Agrocinopine (an opine)/Agrocin 84 (an antibiotic) porter from Agrobacterium radiobacter (see 3 papers)
    44% identity, 89% coverage of query (233 bits)

SAPD_SALTY / P36636 Peptide transport system ATP-binding protein SapD from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
TC 3.A.1.5.5 / P36636 SapD aka STM1695, component of Probable cationic peptide porter (may also take up peptide antibiotics and protamine; implicated in K+ homeostasis) [SapD can stimulate the K+ uptake activities of TrkH and TrkG (TC #2.A.38.1.1) in the presence of ATP] from Salmonella typhimurium (see 2 papers)
    41% identity, 89% coverage of query (230 bits)

DPPD_CALS4 / Q8RDH4 Dipeptide transport ATP-binding protein DppD; EC 7.4.2.9 from Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis) (see paper)
    37% identity, 89% coverage of query (196 bits)

4fwiB / Q8RDH4 Crystal structure of the nucleotide-binding domain of a dipeptide abc transporter (see paper)
    36% identity, 89% coverage of query (191 bits)

7z18I E. Coli c-p lyase bound to a phnk abc dimer and atp
    41% identity, 78% coverage of query (172 bits)

7z15I / P16678 E. Coli c-p lyase bound to a phnk/phnl dual abc dimer and adp + pi (see paper)
    41% identity, 78% coverage of query (172 bits)

7z16I E. Coli c-p lyase bound to phnk/phnl dual abc dimer with amppnp and phnk e171q mutation
    40% identity, 78% coverage of query (171 bits)

MetN / b0199 L-methionine/D-methionine ABC transporter ATP binding subunit (EC 7.4.2.11) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
MetN / P30750 L-methionine/D-methionine ABC transporter ATP binding subunit (EC 7.4.2.11) from Escherichia coli (strain K12) (see 3 papers)
METN_ECOLI / P30750 Methionine import ATP-binding protein MetN; EC 7.4.2.11 from Escherichia coli (strain K12) (see 7 papers)
P30750 ABC-type methionine transporter (subunit 2/2) (EC 7.4.2.11) from Escherichia coli (see 3 papers)
TC 3.A.1.24.1 / P30750 MetN, D-methionine transport ATP-binding protein, component of The L- and D-methionine porter (also transports formyl-L-methionine and other methionine derivatives) (Zhang et al., 2003). The 3.7A structure of MetNI has been solved. An allosteric regulatory mechanism operates at the level of transport activity, so increased intracellular levels of the transported ligand stabilize an inward-facing, ATPase-inactive state of MetNI to inhibit further ligand translocation into the cell from Escherichia coli (see 5 papers)
    32% identity, 79% coverage of query (130 bits)

4u00A / Q5SJ55 Crystal structure of ttha1159 in complex with adp (see paper)
    36% identity, 77% coverage of query (129 bits)

3tuzC Inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form
    31% identity, 79% coverage of query (129 bits)

3tuiC Inward facing conformations of the metni methionine abc transporter: cy5 native crystal form
    31% identity, 79% coverage of query (129 bits)

6cvlD / P30750 Crystal structure of the escherichia coli atpgs-bound metni methionine abc transporter in complex with its metq binding protein (see paper)
    31% identity, 79% coverage of query (129 bits)

7ahhC Opua inhibited inward-facing, sbd docked
    33% identity, 72% coverage of query (123 bits)

7aheC / Q9KIF7 Opua inhibited inward facing (see paper)
    33% identity, 72% coverage of query (123 bits)

1f3oA / Q58206 Crystal structure of mj0796 atp-binding cassette (see paper)
    33% identity, 71% coverage of query (122 bits)

3c4jA Abc protein artp in complex with atp-gamma-s
    34% identity, 77% coverage of query (121 bits)

3c41J / D0VWX4 Abc protein artp in complex with amp-pnp/mg2+
    34% identity, 77% coverage of query (121 bits)

2olkA Abc protein artp in complex with adp-beta-s
    34% identity, 77% coverage of query (121 bits)

2oljA Abc protein artp in complex with adp/mg2+
    34% identity, 77% coverage of query (121 bits)

1l2tA Dimeric structure of mj0796, a bacterial abc transporter cassette
    33% identity, 71% coverage of query (120 bits)

4ymuJ / Q8RCC2 Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
    31% identity, 71% coverage of query (103 bits)

P0AAH0 Phosphate import ATP-binding protein PstB; ABC phosphate transporter; Phosphate-transporting ATPase; EC 7.3.2.1 from Escherichia coli (strain K12)
    30% identity, 75% coverage of query (102 bits)

5lilA / Q2EHL8 Structure of aggregatibacter actinomycetemcomitans macb bound to atpys (p21) (see paper)
    30% identity, 74% coverage of query (101 bits)

8wm7C / Q8YZ76 Cryo-em structure of cyanobacterial nitrate/nitrite transporter nrtbcd in complex with signalling protein pii (see paper)
    32% identity, 71% coverage of query (101 bits)

FhuC / b0151 iron(III) hydroxamate ABC transporter ATP binding subunit (EC 7.2.2.16) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
FhuC / P07821 iron(III) hydroxamate ABC transporter ATP binding subunit (EC 7.2.2.16) from Escherichia coli (strain K12) (see paper)
FHUC_ECOLI / P07821 Iron(3+)-hydroxamate import ATP-binding protein FhuC; Ferric hydroxamate uptake protein C; Ferrichrome transport ATP-binding protein FhuC; Iron(III)-hydroxamate import ATP-binding protein FhuC; EC 7.2.2.16 from Escherichia coli (strain K12) (see 3 papers)
TC 3.A.1.14.3 / P07821 FhuC aka B0151, component of Iron (Fe3+)-hydroxamate (ferrichrome, coprogen, aerobactin, ferrioxamine B, schizakinen, rhodotorulic acid) porter, albomycin porter from Escherichia coli (see 6 papers)
fhuC / GB|BAB96727.2 ferrichrome transport ATP-binding protein FhuC; EC 3.6.3.34 from Escherichia coli K12 (see 8 papers)
    32% identity, 73% coverage of query (101 bits)

5lj7A / Q2EHL8 Structure of aggregatibacter actinomycetemcomitans macb bound to atp (p21) (see paper)
    30% identity, 74% coverage of query (101 bits)

8w9mC Cryo-em structure of the cyanobacterial nitrate transporter nrtbcd in complex with atp
    32% identity, 71% coverage of query (99.0 bits)

5ws4A / A0A0D8G707 Crystal structure of tripartite-type abc transporter macb from acinetobacter baumannii (see paper)
    34% identity, 70% coverage of query (99.0 bits)

8hprC Lpqy-sugabc in state 4
    30% identity, 78% coverage of query (96.3 bits)

8hplC / A0R2C0 Lpqy-sugabc in state 1 (see paper)
    30% identity, 78% coverage of query (96.3 bits)

8hprD Lpqy-sugabc in state 4
    30% identity, 78% coverage of query (95.9 bits)

7d0aB Acinetobacter mlafedb complex in adp-vanadate trapped vclose conformation
    30% identity, 75% coverage of query (95.5 bits)

7d08B / A0A086HZU3 Acinetobacter mlafedb complex in atp-bound vtrans1 conformation (see paper)
    30% identity, 75% coverage of query (95.5 bits)

Build an alignment

Build an alignment for GFF3629 and 68 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

2d62A / O57933 Crystal structure of multiple sugar binding transport atp- binding protein
    29% identity, 77% coverage of query (94.7 bits)

MALK_SALTY / P19566 Maltose/maltodextrin import ATP-binding protein MalK; EC 7.5.2.1 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
    31% identity, 78% coverage of query (93.2 bits)

1vciA / O57758 Crystal structure of the atp-binding cassette of multisugar transporter from pyrococcus horikoshii ot3 complexed with atp (see paper)
    30% identity, 75% coverage of query (93.2 bits)

sugC / P9WQI3 ABC-type trehalose transporter ATP-binding protein from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
SUGC_MYCTU / P9WQI3 Trehalose import ATP-binding protein SugC; MtbSugC; Nucleotide-binding domain of SugABC transporter; NBD of SugABC transporter; SugABC transporter ATPase SugC; EC 7.5.2.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
TC 3.A.1.1.31 / O50454 PROBABLE SUGAR-TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER SUGC, component of The trehalose-recycling ABC transporter, LpqY-SugA-SugB-SugC (essential for virulence) from Mycobacterium tuberculosis (see 2 papers)
    30% identity, 73% coverage of query (92.8 bits)

6z5uK Cryo-em structure of the a. Baumannii mlabdef complex bound to appnhp
    29% identity, 74% coverage of query (92.4 bits)

3puyA Crystal structure of an outward-facing mbp-maltose transporter complex bound to amp-pnp after crystal soaking of the pretranslocation state
    32% identity, 72% coverage of query (92.4 bits)

3puxA Crystal structure of an outward-facing mbp-maltose transporter complex bound to adp-bef3
    32% identity, 72% coverage of query (92.4 bits)

3puwA Crystal structure of an outward-facing mbp-maltose transporter complex bound to adp-alf4
    32% identity, 72% coverage of query (92.4 bits)

3puvA Crystal structure of an outward-facing mbp-maltose transporter complex bound to adp-vo4
    32% identity, 72% coverage of query (92.4 bits)

2awnB / P68187 Crystal structure of the adp-mg-bound e. Coli malk (crystallized with atp-mg) (see paper)
    32% identity, 72% coverage of query (92.0 bits)

1q12A Crystal structure of the atp-bound e. Coli malk
    32% identity, 72% coverage of query (92.0 bits)

MalK / b4035 maltose ABC transporter ATP binding subunit (EC 7.5.2.1) from Escherichia coli K-12 substr. MG1655 (see 31 papers)
MalK / P68187 maltose ABC transporter ATP binding subunit (EC 7.5.2.1) from Escherichia coli (strain K12) (see 29 papers)
MALK_ECOLI / P68187 Maltose/maltodextrin import ATP-binding protein MalK; EC 7.5.2.1 from Escherichia coli (strain K12) (see 6 papers)
P68187 ABC-type maltose transporter (subunit 3/3) (EC 7.5.2.1) from Escherichia coli (see paper)
TC 3.A.1.1.1 / P68187 Maltose/maltodextrin import ATP-binding protein MalK aka B4035, component of Maltooligosaccharide porter. The 3-D structure has been reported by Oldham et al. (2007). An altering access mechanism has been suggested for the maltose transporter resulting from rigid-body rotations (Khare et al., 2009). Bordignon et al. (2010) and Schneider et al. (2012) have reviewed the extensive knowledge available on MalEFGK2, its mode of action and its regulatory interactions from Escherichia coli (see 17 papers)
malK / RF|NP_418459 maltose/maltodextrin import ATP-binding protein malK; EC 3.6.3.19 from Escherichia coli K12 (see 18 papers)
    32% identity, 72% coverage of query (92.0 bits)

7chaI / Q9HVW1 Cryo-em structure of p.Aeruginosa mlafebd with amppnp (see paper)
    31% identity, 76% coverage of query (90.5 bits)

3fvqB / Q5FA19 Crystal structure of the nucleotide binding domain fbpc complexed with atp (see paper)
    32% identity, 73% coverage of query (90.5 bits)

TGD3_ARATH / Q9AT00 Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic; ABC transporter I family member 13; ABC transporter ABCI.13; AtABCI13; Non-intrinsic ABC protein 11; AtNAP11 from Arabidopsis thaliana (Mouse-ear cress) (see 6 papers)
TC 3.A.1.27.2 / Q9AT00 Tdg3, component of The chloroplast lipid (trigalactosyl diacyl glycerol (TDG)) transporter, Tdg1,2,3 (Lu et al., 2007). Lipids such as mono- and digalactolipids are synthesized in the endoplasmic reticulum (ER) of plant cells and transferred to the thylakoid membranes of chloroplasts. Mutations in an outer chloroplastic envelope protein with 350 aas and 7 putative TMSs in the last 250 residues may catalyze translocation as part of a lipid transfer complex from Arabidopsis thaliana (Mouse-ear cress) (see 7 papers)
    29% identity, 73% coverage of query (89.7 bits)

1oxvD Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus
    27% identity, 76% coverage of query (89.7 bits)

1oxvA Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus
    27% identity, 76% coverage of query (89.7 bits)

GLCV_SACS2 / Q97UY8 Glucose import ATP-binding protein GlcV; EC 7.5.2.- from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see 3 papers)
TC 3.A.1.1.13 / Q97UY8 GlcV, component of Glucose, mannose, galactose porter from Sulfolobus solfataricus (see 3 papers)
1oxuA / Q97UY8 Crystal structure of glcv, the abc-atpase of the glucose abc transporter from sulfolobus solfataricus (see paper)
    27% identity, 76% coverage of query (89.7 bits)

1g291 / Q9YGA6 Malk (see paper)
    28% identity, 72% coverage of query (88.6 bits)

ECSA_BACSU / P55339 ABC-type transporter ATP-binding protein EcsA from Bacillus subtilis (strain 168) (see paper)
TC 3.A.1.143.1 / P55339 ABC-type transporter ATP-binding protein EcsA, component of The exoprotein (including α-amylase) secretion system, EcsAB(C) (Leskelä et al., 1999). Also may play roles in sporulation, competence (Leskelä et al., 1996) and transformation using purified DNA (Takeno et al., 2011). An involvement of EcsC in transport is not established, but it is homologous to the C-terminus of the P-type ATPase, 3.A.3.31.2 from Bacillus subtilis (strain 168) (see 3 papers)
    28% identity, 72% coverage of query (88.2 bits)

4yerA / Q9X1C3 Crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution
    28% identity, 73% coverage of query (87.8 bits)

2awnC / P68187 Crystal structure of the adp-mg-bound e. Coli malk (crystallized with atp-mg) (see paper)
    29% identity, 72% coverage of query (86.7 bits)

ECFA1_STRT2 / Q5M243 Energy-coupling factor transporter ATP-binding protein EcfA1; ECF transporter A component EcfA1; EC 7.-.-.- from Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) (see paper)
TC 3.A.1.25.6 / Q5M243 Energy-coupling factor transporter ATP-binding protein EcfA 2, component of Riboflavin ECF transport system, EcfAA'T/RibU from Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311)
    29% identity, 75% coverage of query (86.7 bits)

5x40A / O68106 Structure of a cbio dimer bound with amppcp (see paper)
    33% identity, 72% coverage of query (85.9 bits)

STE6_YEAST / P12866 Alpha-factor-transporting ATPase; Mating factor A secretion protein STE6; Multiple drug resistance protein homolog; P-glycoprotein; EC 7.4.2.7 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
P12866 ABC-type alpha-factor-pheromone transporter (EC 7.4.2.7) from Saccharomyces cerevisiae (see paper)
TC 3.A.1.206.1 / P12866 a-Factor sex pheromone (a hydrophobic isoprenylated (farnesylated) carboxymethylated peptide) exporter, Ste6 from Saccharomyces cerevisiae (Baker's yeast) (see 9 papers)
STE6 / RF|NP_012713.1 alpha-factor-transporting ATPase from Saccharomyces cerevisiae
    29% identity, 72% coverage of query (83.6 bits)

ABCBA_HUMAN / Q9NRK6 ATP-binding cassette sub-family B member 10, mitochondrial; ABC-mitochondrial erythroid protein; ABC-me protein; ATP-binding cassette transporter 10; ABC transporter 10 protein; Mitochondrial ATP-binding cassette 2; M-ABC2 from Homo sapiens (Human) (see 7 papers)
Q9NRK6 bacterial ABC-type protein transporter (EC 7.4.2.5) from Homo sapiens (see paper)
    29% identity, 77% coverage of query (82.0 bits)

6b8bA E. Coli lptb in complex with adp and a novobiocin derivative
    32% identity, 72% coverage of query (81.6 bits)

6b89A E. Coli lptb in complex with adp and novobiocin
    32% identity, 72% coverage of query (81.6 bits)

4p31A Crystal structure of a selenomethionine derivative of e. Coli lptb in complex with adp-magensium
    32% identity, 72% coverage of query (81.6 bits)

6q81A Structure of p-glycoprotein(abcb1) in the post-hydrolytic state
    27% identity, 72% coverage of query (81.3 bits)

3g61A Structure of p-glycoprotein reveals a molecular basis for poly- specific drug binding
    27% identity, 72% coverage of query (81.3 bits)

3g60A Structure of p-glycoprotein reveals a molecular basis for poly- specific drug binding
    27% identity, 72% coverage of query (81.3 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory