Searching for up to 100 curated homologs for GFF3754 FitnessBrowser__Marino:GFF3754 (689 a.a.)
Found high-coverage hits (≥70%) to 28 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
AO356_14165 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas fluorescens FW300-N2C3
58% identity, 88% coverage of query (729 bits)
PS417_25975 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas simiae WCS417
57% identity, 88% coverage of query (720 bits)
Q8L0X1 long-chain acyl-CoA dehydrogenase (EC 1.3.8.8) from Acinetobacter sp. (see paper)
54% identity, 88% coverage of query (633 bits)
Psest_0419 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas stutzeri RCH2
50% identity, 87% coverage of query (572 bits)
BPHYT_RS03220 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Burkholderia phytofirmans PsJN
49% identity, 88% coverage of query (570 bits)
Q88L87 medium-chain acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas putida (see paper)
49% identity, 87% coverage of query (554 bits)
HP15_2478 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Marinobacter adhaerens HP15
48% identity, 86% coverage of query (553 bits)
AO353_07485 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas fluorescens FW300-N2E3
48% identity, 87% coverage of query (546 bits)
AO356_14190 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas fluorescens FW300-N2C3
49% identity, 87% coverage of query (545 bits)
PS417_25960 Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas simiae WCS417
48% identity, 87% coverage of query (542 bits)
DMDC_ROSNI / A3SI50 3-methylmercaptopropionyl-CoA dehydrogenase; MMPA-CoA dehydrogenase; EC 1.3.99.41 from Roseovarius nubinhibens (strain ATCC BAA-591 / DSM 15170 / ISM) (see paper)
44% identity, 87% coverage of query (504 bits)
AZOBR_RS05755 Butyryl-CoA dehydrogenase (EC 1.3.8.1) from Azospirillum brasilense Sp245
42% identity, 87% coverage of query (430 bits)
dmdC / Q5LLW7 3-(methylsulfanyl)propanoyl-CoA dehydrogenase monomer (EC 1.3.99.41) from Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (see 2 papers)
DMDC_RUEPO / Q5LLW7 3-methylmercaptopropionyl-CoA dehydrogenase; MMPA-CoA dehydrogenase; EC 1.3.99.41 from Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi) (see paper)
41% identity, 86% coverage of query (429 bits)
Sama_1743 Acyl-CoA dehydrogenase (EC 1.3.8.-) from Shewanella amazonensis SB2B
42% identity, 87% coverage of query (429 bits)
RR42_RS04580 Butyryl-CoA dehydrogenase (EC 1.3.8.1) from Cupriavidus basilensis FW507-4G11
42% identity, 84% coverage of query (428 bits)
FADE5_MYCS2 / Q3L887 Broad-specificity linear acyl-CoA dehydrogenase FadE5; Long-chain-acyl-CoA dehydrogenase; Medium-chain-acyl-CoA dehydrogenase; Short-chain-acyl-CoA dehydrogenase; EC 1.3.8.8; EC 1.3.8.7; EC 1.3.8.1 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
34% identity, 87% coverage of query (298 bits)
6ksaB / Q3L887 Crystal structure of e447a acyl-coa dehydrogenase fade5 mutant from mycobacteria smegmatis in complex with c18coa (see paper)
34% identity, 87% coverage of query (293 bits)
6lq8A Crystal structure of e447a acyl-coa dehydrogenase fade5 mutant from mycobacteria smegmatis in complex with c22coa
34% identity, 87% coverage of query (293 bits)
6lq7A Crystal structure of e447a acyl-coa dehydrogenase fade5 mutant from mycobacteria smegmatis in complex with c17coa
34% identity, 87% coverage of query (293 bits)
6lq6A Crystal structure of e447a acyl-coa dehydrogenase fade5 mutant from mycobacteria smegmatis in complex with c20coa
34% identity, 87% coverage of query (293 bits)
6lq1A Crystal structure of e447a acyl-coa dehydrogenase fade5 mutant from mycobacteria smegmatis in complex with c8coa
34% identity, 87% coverage of query (293 bits)
6lq0A Crystal structure of e447a acyl-coa dehydrogenase fade5 mutant from mycobacteria smegmatis in complex with c6coa
34% identity, 87% coverage of query (293 bits)
6lpyA Crystal structure of e447a acyl-coa dehydrogenase fade5 mutant from mycobacteria smegmatis in complex with c4coa
34% identity, 87% coverage of query (293 bits)
6ksbA Crystal structure of e447a m130g acyl-coa dehydrogenase fade5 mutant from mycobacteria smegmatis in complex with c16coa
34% identity, 87% coverage of query (292 bits)
FADE5_MYCTU / O53666 Broad-specificity linear acyl-CoA dehydrogenase FadE5; Long-chain-acyl-CoA dehydrogenase; Medium-chain-acyl-CoA dehydrogenase; Short-chain-acyl-CoA dehydrogenase; EC 1.3.8.8; EC 1.3.8.7; EC 1.3.8.1 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
35% identity, 87% coverage of query (282 bits)
6kseA / O53666 Crystal structure of e447a acyl-coa dehydrogenase fade5 mutant from mycobacteria tuberculosisin complex with c18coa (see paper)
34% identity, 87% coverage of query (278 bits)
BCD1_SYNWW / Q0AVM4 Butyryl-CoA dehydrogenase Swol_1933; BCD; EC 1.3.8.1 from Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) (see 2 papers)
32% identity, 83% coverage of query (264 bits)
BCD2_SYNWW / Q0AVA8 Butyryl-CoA dehydrogenase Swol_2052; BCD; EC 1.3.8.1 from Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) (see 2 papers)
30% identity, 83% coverage of query (243 bits)
Build an alignment for GFF3754 and 28 homologs with ≥ 30% identity
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Lawrence Berkeley National Laboratory