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Searching for up to 100 curated homologs for GFF3781 FitnessBrowser__Marino:GFF3781 (978 a.a.)

Found high-coverage hits (≥70%) to 8 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

AO356_07335 fructose-specific PTS system (fructose 1-phosphate forming), EI, Hpr, and EII-A components from Pseudomonas fluorescens FW300-N2C3
    49% identity, 96% coverage of query (848 bits)

AO353_05485 Fructose-specific PTS system, I, HPr, and IIA components from Pseudomonas fluorescens FW300-N2E3
    50% identity, 96% coverage of query (847 bits)

TC 4.A.2.1.17 / Q9HY55 Phosphotransferase system transporter enzyme I, FruI, component of Fructose-specific PTS permease, FruIIBC/FruI-HPr-IIA from Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
    50% identity, 96% coverage of query (830 bits)

PS417_03965 fructose-specific PTS system (fructose 1-phosphate forming), EI, Hpr, and EII-A components from Pseudomonas simiae WCS417
    49% identity, 96% coverage of query (822 bits)

Pf1N1B4_1146 fructose-specific PTS system (fructose 1-phosphate forming), EI, Hpr, and EII-A components from Pseudomonas fluorescens FW300-N1B4
    49% identity, 96% coverage of query (818 bits)

Psest_3355 fructose-specific PTS system (fructose 1-phosphate forming), EI, Hpr, and EII-A components from Pseudomonas stutzeri RCH2
    49% identity, 93% coverage of query (802 bits)

PS417_23035 D-trehalose PTS system, I, HPr, and IIA components from Pseudomonas simiae WCS417
    42% identity, 71% coverage of query (464 bits)

BPHYT_RS02740 N-acetylglucosamine-specific PTS system, I, HPr, and IIA components (nagF) from Burkholderia phytofirmans PsJN
    41% identity, 73% coverage of query (403 bits)

Build an alignment

Build an alignment for GFF3781 and 8 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory