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Searching for up to 100 curated homologs for GFF3874 FitnessBrowser__psRCH2:GFF3874 (110 a.a.)

Found high-coverage hits (≥70%) to 15 curated proteins.

Removed hits that are identical to the query, leaving 14

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

PfGW456L13_303 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) from Pseudomonas fluorescens GW456-L13
    94% identity, 98% coverage of query (207 bits)

Pf1N1B4_1566 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) from Pseudomonas fluorescens FW300-N1B4
    92% identity, 98% coverage of query (206 bits)

AO353_12360 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) from Pseudomonas fluorescens FW300-N2E3
    90% identity, 98% coverage of query (203 bits)

AO356_09525 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) from Pseudomonas fluorescens FW300-N2C3
Pf6N2E2_3783 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) from Pseudomonas fluorescens FW300-N2E2
    90% identity, 98% coverage of query (203 bits)

PS417_01850 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) from Pseudomonas simiae WCS417
    86% identity, 98% coverage of query (196 bits)

PP_5015 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) from Pseudomonas putida KT2440
    87% identity, 97% coverage of query (192 bits)

HP15_3195 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) from Marinobacter adhaerens HP15
    68% identity, 99% coverage of query (145 bits)

hisE / BAC65278.1 phosphoribosyl-ATP pyrophosphatase from Burkholderia multivorans (see paper)
    52% identity, 97% coverage of query (112 bits)

BPHYT_RS17670 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) from Burkholderia phytofirmans PsJN
    52% identity, 94% coverage of query (108 bits)

AZOBR_RS01690 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) from Azospirillum brasilense Sp245
    48% identity, 96% coverage of query (94.0 bits)

CCNA_03854 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) from Caulobacter crescentus NA1000
    44% identity, 97% coverage of query (71.2 bits)

HisE / b2026 putative bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC 3.5.4.19; EC 3.6.1.31) from Escherichia coli K-12 substr. MG1655 (see 6 papers)
hisI / P06989 putative bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC 3.5.4.19; EC 3.6.1.31) from Escherichia coli (strain K12) (see 5 papers)
    41% identity, 83% coverage of query (62.0 bits)

Ga0059261_1051 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) from Sphingomonas koreensis DSMZ 15582
    44% identity, 96% coverage of query (56.2 bits)

6j2lA / P37793 Crystal structure of bi-functional enzyme (see paper)
    40% identity, 83% coverage of query (55.1 bits)

Build an alignment

Build an alignment for GFF3874 and 14 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory