Searching for up to 100 curated homologs for GFF3914 FitnessBrowser__Phaeo:GFF3914 (615 a.a.)
Found high-coverage hits (≥70%) to 8 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
wbgZ / Q9F736 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining) (EC 4.2.1.135) from Shigella sonnei (see paper)
48% identity, 80% coverage of query (434 bits)
P72145 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting) (EC 4.2.1.115) from Pseudomonas aeruginosa (see paper)
41% identity, 93% coverage of query (417 bits)
wbpM / Q9KIC5 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining) (EC 4.2.1.135) from Pseudomonas aeruginosa (see 6 papers)
47% identity, 77% coverage of query (415 bits)
RfbU / CAA69127.1 mannosyl-transferase from Vibrio cholerae (see paper)
44% identity, 85% coverage of query (398 bits)
wbkD / Q2YMM0 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining) (EC 4.2.1.135) from Brucella abortus (strain 2308) (see 2 papers)
43% identity, 75% coverage of query (347 bits)
wbiI / GI|3135688 putative epimerase/dehydratase WbiI from Burkholderia pseudomallei (see paper)
42% identity, 81% coverage of query (334 bits)
cpsE polysaccharide capsule synthesis protein CpsE from Streptococcus iniae (see paper)
39% identity, 73% coverage of query (299 bits)
pglF / Q0P9D4 UDP-N-acetylglucosamine C-6 dehydratase (EC 4.2.1.135) from Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) (see 3 papers)
PGLF_CAMJE / Q0P9D4 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase; UDP-GlcNAc C6 dehydratase; Protein glycosylation pathway protein F; UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining); EC 4.2.1.135 from Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) (see paper)
37% identity, 71% coverage of query (277 bits)
Build an alignment for GFF3914 and 8 homologs with ≥ 30% identity
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Lawrence Berkeley National Laboratory