Searching for up to 100 curated homologs for GFF3953 FitnessBrowser__Marino:GFF3953 (499 a.a.)
Found high-coverage hits (≥70%) to 46 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
libA / G3K3F8 linuron hydrolase from Variovorax sp. SRS16 (see 2 papers)
38% identity, 97% coverage of query (249 bits)
tpdC / M1X895 (Z)-N,N'-(but-2-ene-2,3-diyl)diacetamide hydrolase from Rhodococcus sp. TMP1 (see paper)
tpdC / CCN27361.1 amidase from Rhodococcus sp. TMP1 (see paper)
37% identity, 99% coverage of query (245 bits)
nylA / P13398 6-aminohexanoate cyclic dimer hydrolase monomer (EC 3.5.2.12) from Paenarthrobacter ureafaciens (see 4 papers)
NYLA_PAEUR / P13398 6-aminohexanoate-cyclic-dimer hydrolase; Nylon oligomers-degrading enzyme EI; EC 3.5.2.12 from Paenarthrobacter ureafaciens (see paper)
38% identity, 97% coverage of query (243 bits)
B5MF68 6-aminohexanoate-cyclic-dimer hydrolase (EC 3.5.2.12) from Rhodococcus sp. U-224 (see paper)
38% identity, 97% coverage of query (243 bits)
3a2qA / P13398 Structure of 6-aminohexanoate cyclic dimer hydrolase complexed with substrate (see paper)
38% identity, 97% coverage of query (242 bits)
B7XBZ7 6-aminohexanoate-cyclic-dimer hydrolase (EC 3.5.2.12) from Cupriavidus sp. T7 (see 2 papers)
B7XBZ8 6-aminohexanoate-cyclic-dimer hydrolase (EC 3.5.2.12) from Acidovorax sp. T31 (see 2 papers)
37% identity, 97% coverage of query (241 bits)
B7XC00 6-aminohexanoate-cyclic-dimer hydrolase (EC 3.5.2.12) from Sphingomonas sp. U238 (see 2 papers)
37% identity, 97% coverage of query (238 bits)
B7XBZ9 6-aminohexanoate-cyclic-dimer hydrolase (EC 3.5.2.12) from Cupriavidus sp. U124 (see 2 papers)
37% identity, 97% coverage of query (238 bits)
Q5YFS2 amidase (EC 3.5.1.4) from Achromobacter xylosoxidans (see paper)
36% identity, 95% coverage of query (213 bits)
lpa / Q5XVM9 lipoamidase (EC 3.5.1.138) from Enterococcus faecalis (see 2 papers)
33% identity, 97% coverage of query (182 bits)
AAM_RHOER / K9NBS6 Acylamidase; EC 3.5.1.13; EC 3.5.1.14; EC 3.5.1.4 from Rhodococcus erythropolis (Arthrobacter picolinophilus) (see paper)
30% identity, 97% coverage of query (165 bits)
3h0lA / O66610 Structure of tRNA-dependent amidotransferase gatcab from aquifex aeolicus (see paper)
31% identity, 96% coverage of query (162 bits)
3h0mA Structure of tRNA-dependent amidotransferase gatcab from aquifex aeolicus
31% identity, 96% coverage of query (162 bits)
gatA / Q9RTA9 glutamyl-tRNAGln amidotransferase subunit A (EC 6.3.5.7; EC 6.3.5.6) from Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1) (see paper)
31% identity, 91% coverage of query (137 bits)
Build an alignment for GFF3953 and 14 homologs with ≥ 30% identity
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C3UWD1 aryl-acylamidase (EC 3.5.1.13) from bacterium CSBL00001 (see 2 papers)
28% identity, 96% coverage of query (137 bits)
4yjiA / C3UWD1 The crystal structure of a bacterial aryl acylamidase belonging to the amidase signature (as) enzymes family (see paper)
28% identity, 96% coverage of query (135 bits)
6diiH / Q7XJJ7 Structure of arabidopsis fatty acid amide hydrolase in complex with methyl linolenyl fluorophosphonate (see paper)
28% identity, 87% coverage of query (130 bits)
FAAH_ARATH / Q7XJJ7 Fatty acid amide hydrolase; AtFAAH; N-acylethanolamine amidohydrolase; EC 3.5.1.99 from Arabidopsis thaliana (Mouse-ear cress) (see 10 papers)
Q7XJJ7 fatty acid amide hydrolase (EC 3.5.1.99) from Arabidopsis thaliana (see paper)
28% identity, 87% coverage of query (130 bits)
FAAH_MEDTR / G7ISB0 Fatty acid amide hydrolase; N-acylethanolamine amidohydrolase; EC 3.5.1.- from Medicago truncatula (Barrel medic) (Medicago tribuloides) (see paper)
28% identity, 84% coverage of query (127 bits)
gatA / O06491 glutamyl-tRNAGln amidotransferase subunit A (EC 6.3.5.7) from Bacillus subtilis (strain 168) (see paper)
GATA_BACSU / O06491 Glutamyl-tRNA(Gln) amidotransferase subunit A; Glu-ADT subunit A; EC 6.3.5.7 from Bacillus subtilis (strain 168) (see 2 papers)
29% identity, 95% coverage of query (121 bits)
F6N111 aryl-acylamidase (EC 3.5.1.13) from Paracoccus sp. M1-1 (see paper)
G9FKH7 amidase (EC 3.5.1.4) from Paracoccus sp. (see paper)
28% identity, 94% coverage of query (117 bits)
Q9X0Z9 glutaminyl-tRNA synthase (glutamine-hydrolysing) (EC 6.3.5.7) from Thermotoga maritima (see paper)
27% identity, 86% coverage of query (114 bits)
3kfuE / Q9LCX3 Crystal structure of the transamidosome (see paper)
32% identity, 93% coverage of query (114 bits)
P95896 amidase (EC 3.5.1.4); nitrilase (EC 3.5.5.1) from Saccharolobus solfataricus (see 3 papers)
25% identity, 84% coverage of query (113 bits)
cahA / BAC15598.1 carbaryl hydrolase from Arthrobacter sp. RC100 (see paper)
30% identity, 92% coverage of query (111 bits)
FAAH_ORYSJ / Q0JFH7 Fatty acid amide hydrolase; N-acylethanolamine amidohydrolase; EC 3.5.1.- from Oryza sativa subsp. japonica (Rice) (see paper)
27% identity, 97% coverage of query (110 bits)
P63488 glutaminyl-tRNA synthase (glutamine-hydrolysing) (subunit 2/2) (EC 6.3.5.7) from Staphylococcus aureus (see paper)
2dqnA / P63488 Structure of tRNA-dependent amidotransferase gatcab complexed with asn (see paper)
28% identity, 86% coverage of query (99.8 bits)
2f2aA Structure of tRNA-dependent amidotransferase gatcab complexed with gln
28% identity, 86% coverage of query (99.8 bits)
P22984 amidase (EC 3.5.1.4) from Rhodococcus erythropolis (see 2 papers)
Q7DKE4 amidase (EC 3.5.1.4) from Rhodococcus sp. N-771 (see paper)
amdA / AAA62721.1 enantiomer-selective amidase from Brevibacterium sp (see paper)
CAA38009.1 amidase from Rhodococcus sp (see paper)
30% identity, 85% coverage of query (99.4 bits)
amdA / P27765 nicotinamidase (EC 3.5.1.19) from Pseudomonas chlororaphis (see paper)
27% identity, 85% coverage of query (97.8 bits)
3a1iA / Q7DKE4 Crystal structure of rhodococcus sp. N-771 amidase complexed with benzamide (see paper)
29% identity, 85% coverage of query (97.8 bits)
B1GY01 nitrilase (EC 3.5.5.1) from Rhodococcus erythropolis (see paper)
29% identity, 85% coverage of query (95.1 bits)
Q9CZN8 glutaminyl-tRNA synthase (glutamine-hydrolysing) (EC 6.3.5.7) from Mus musculus (see paper)
24% identity, 93% coverage of query (94.7 bits)
GATA_HUMAN / Q9H0R6 Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Glu-AdT subunit A; Glutaminyl-tRNA synthase-like protein 1; EC 6.3.5.7 from Homo sapiens (Human) (see 3 papers)
Q9H0R6 glutaminyl-tRNA synthase (glutamine-hydrolysing) (EC 6.3.5.7) from Homo sapiens (see paper)
26% identity, 93% coverage of query (93.2 bits)
CNBH_COMTE / Q38M35 2-amino-5-chloromuconic acid deaminase; 2-aminomuconate deaminase; EC 3.5.99.5 from Comamonas testosteroni (Pseudomonas testosteroni) (see paper)
26% identity, 93% coverage of query (92.4 bits)
clbL / Q0P7K2 colibactin biosynthesis amidase ClbL from Escherichia coli (see 4 papers)
26% identity, 95% coverage of query (84.3 bits)
GATA_ARATH / Q9LI77 Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Glu-AdT subunit A; EC 6.3.5.7 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
27% identity, 92% coverage of query (82.4 bits)
atzE / Q936X3 1-carboxybiuret hydrolase catalytic subunit (EC 3.5.1.3; EC 3.5.1.131) from Pseudomonas sp. (strain ADP) (see 2 papers)
ATZE_PSESD / Q936X3 1-carboxybiuret hydrolase subunit AtzE; EC 3.5.1.131 from Pseudomonas sp. (strain ADP) (see 2 papers)
Q936X3 1-carboxybiuret hydrolase (EC 3.5.1.131) from Pseudomonas sp. ADP (see paper)
6c6gA / Q936X3 An unexpected vestigial protein complex reveals the evolutionary origins of an s-triazine catabolic enzyme. Inhibitor bound complex. (see paper)
27% identity, 93% coverage of query (80.1 bits)
FDB95_GIBM7 / W7MLD8 Amidase FVEG_08295; Fusarium detoxification of benzoxazolinone cluster 1 protein FVEG_08295; FDB1 cluster protein FVEG_08295; EC 3.5.1.4 from Gibberella moniliformis (strain M3125 / FGSC 7600) (Maize ear and stalk rot fungus) (Fusarium verticillioides) (see 4 papers)
24% identity, 75% coverage of query (79.7 bits)
AMID_RHORH / P84650 Enantioselective amidase; EC 3.5.1.4 from Rhodococcus rhodochrous
27% identity, 86% coverage of query (79.7 bits)
tms2 / P0A2X0 indoleacetamide hydrolase (EC 3.5.1.4) from Rhizobium radiobacter (see paper)
25% identity, 72% coverage of query (78.6 bits)
4n0iA / Q03557 Crystal structure of s. Cerevisiae mitochondrial gatfab in complex with glutamine (see paper)
23% identity, 89% coverage of query (70.5 bits)
AMI1 / Q9FR37 indole-3-acetamide amidohydrolase (EC 3.5.1.4) from Arabidopsis thaliana (see 5 papers)
AMI1_ARATH / Q9FR37 Amidase 1; AtAMI1; Translocon at the outer membrane of chloroplasts 64-I; AtTOC64-I; EC 3.5.1.4 from Arabidopsis thaliana (Mouse-ear cress) (see 6 papers)
26% identity, 78% coverage of query (69.3 bits)
4gysB / Q0BRB0 Granulibacter bethesdensis allophanate hydrolase co-crystallized with malonate (see paper)
25% identity, 83% coverage of query (62.0 bits)
atzF / Q936X2 allophanate hydrolase subunit from Pseudomonas sp. (strain ADP) (see 2 papers)
ATZF_PSESD / Q936X2 Allophanate hydrolase; EC 3.5.1.54 from Pseudomonas sp. (strain ADP) (see 2 papers)
Q936X2 allophanate hydrolase (EC 3.5.1.54) from Pseudomonas sp. ADP (see paper)
27% identity, 84% coverage of query (61.6 bits)
MANHY_PSEPU / Q84DC4 Mandelamide hydrolase; EC 3.5.1.86 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 3 papers)
24% identity, 96% coverage of query (58.2 bits)
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Lawrence Berkeley National Laboratory