Searching for up to 100 curated homologs for GFF3988 FitnessBrowser__Marino:GFF3988 (378 a.a.)
Found high-coverage hits (≥70%) to 100 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
pimD / Q6N3I1 pimeloyl-CoA dehydrogenase small subunit (EC 1.3.1.62) from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) (see paper)
49% identity, 99% coverage of query (357 bits)
Psest_1084 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas stutzeri RCH2
30% identity, 92% coverage of query (140 bits)
Build an alignment for GFF3988 and 2 homologs with ≥ 30% identity
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Pf6N2E2_2191 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens FW300-N2E2
29% identity, 83% coverage of query (136 bits)
REDW_STRCO / O54143 L-prolyl-[peptidyl-carrier protein] dehydrogenase; EC 1.3.8.14 from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) (see 2 papers)
31% identity, 91% coverage of query (135 bits)
IVD_RAT / P12007 Isovaleryl-CoA dehydrogenase, mitochondrial; IVD; Butyryl-CoA dehydrogenase; EC 1.3.8.4; EC 1.3.8.1 from Rattus norvegicus (Rat) (see paper)
P12007 isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Rattus norvegicus (see 2 papers)
32% identity, 80% coverage of query (135 bits)
AO356_01580 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens FW300-N2C3
29% identity, 83% coverage of query (135 bits)
B5UB85 isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Bombyx mori (see paper)
34% identity, 82% coverage of query (134 bits)
PS417_17015 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas simiae WCS417
29% identity, 83% coverage of query (134 bits)
PGA1_c10280 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Phaeobacter inhibens BS107
29% identity, 90% coverage of query (133 bits)
MBCD_SOLTU / Q9FS88 2-methylacyl-CoA dehydrogenase, mitochondrial; 2-methylbutanoyl-CoA dehydrogenase; 2-methylbutyryl-CoA dehydrogenase; 2MBCD; Isovaleryl-CoA dehydrogenase 1; St-IVD1; EC 1.3.8.5 from Solanum tuberosum (Potato) (see 2 papers)
29% identity, 91% coverage of query (133 bits)
ivd1 / CAC08233.1 isovaleryl-CoA dehydrogenase from Solanum tuberosum (see paper)
29% identity, 91% coverage of query (133 bits)
IVD_HUMAN / P26440 Isovaleryl-CoA dehydrogenase, mitochondrial; IVD; Butyryl-CoA dehydrogenase; EC 1.3.8.4; EC 1.3.8.1 from Homo sapiens (Human) (see 8 papers)
30% identity, 93% coverage of query (130 bits)
AO353_20350 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Pseudomonas fluorescens FW300-N2E3
29% identity, 83% coverage of query (130 bits)
Shewana3_2769 Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) from Shewanella sp. ANA-3
28% identity, 92% coverage of query (130 bits)
8sgrA / P26440 8sgrA (see paper)
30% identity, 93% coverage of query (130 bits)
1ivhA Structure of human isovaleryl-coa dehydrogenase at 2.6 angstroms resolution: structural basis for substrate specificity
30% identity, 93% coverage of query (130 bits)
dcaA / AAL09094.1 DcaA from Acinetobacter baylyi (see 11 papers)
31% identity, 91% coverage of query (129 bits)
liuA / Q9I296 isovaleryl-CoA dehydrogenase subunit (EC 1.3.8.4) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
29% identity, 83% coverage of query (129 bits)
Ac3H11_2991 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Acidovorax sp. GW101-3H11
28% identity, 92% coverage of query (129 bits)
acrC / G3KIM8 propionyl-CoA dehydrogenase from Anaerotignum propionicum (see paper)
ACRC_ANAPI / G3KIM8 Acryloyl-CoA reductase (NADH); Propionyl-CoA dehydrogenase; EC 1.3.1.95 from Anaerotignum propionicum (Clostridium propionicum) (see paper)
30% identity, 92% coverage of query (127 bits)
4n5fA / B4EGC8 Crystal structure of a putative acyl-coa dehydrogenase with bound fadh2 from burkholderia cenocepacia j2315
31% identity, 93% coverage of query (127 bits)
SO1679 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) from Shewanella oneidensis MR-1
27% identity, 96% coverage of query (126 bits)
Q18AQ1 butanoyl-CoA dehydrogenase complex (NAD+, ferredoxin) (subunit 3/3) (EC 1.3.1.109); short-chain acyl-CoA dehydrogenase (EC 1.3.8.1) from Clostridioides difficile (see paper)
5ol2F / A0A125V4E7 The electron transferring flavoprotein/butyryl-coa dehydrogenase complex from clostridium difficile (see paper)
30% identity, 82% coverage of query (125 bits)
ptmO4 / D8L2U8 (4S)-homoplatensicyl-CoA dehydrogenase from Streptomyces platensis (see paper)
D8L2U8 long-chain acyl-CoA dehydrogenase (EC 1.3.8.8) from Streptomyces platensis (see paper)
33% identity, 85% coverage of query (124 bits)
ACDC_MYCTU / P9WQG3 Acyl-CoA dehydrogenase FadE12; Medium chain acyl-CoA dehydrogenase; MCADH; EC 1.3.99.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
29% identity, 92% coverage of query (124 bits)
masA / CAO03071.1 MasA protein from Azoarcus sp. HxN1 (see paper)
30% identity, 84% coverage of query (124 bits)
pigA / Q5W254 L-prolyl-S-[peptidyl-carrier protein] dehydrogenase (EC 1.3.8.14) from Serratia marcescens (see 3 papers)
Q5W254 phosphatidylinositol N-acetylglucosaminyltransferase (EC 2.4.1.198) from Serratia marcescens (see paper)
28% identity, 93% coverage of query (124 bits)
4l1fA / D2RL84 Electron transferring flavoprotein of acidaminococcus fermentans: towards a mechanism of flavin-based electron bifurcation (see paper)
29% identity, 94% coverage of query (123 bits)
IVD_ARATH / Q9SWG0 Isovaleryl-CoA dehydrogenase, mitochondrial; IVD; EC 1.3.8.4 from Arabidopsis thaliana (Mouse-ear cress) (see 4 papers)
Q9SWG0 isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Arabidopsis thaliana (see 3 papers)
32% identity, 81% coverage of query (123 bits)
D2RL84 butanoyl-CoA dehydrogenase complex (NAD+, ferredoxin) (subunit 1/3) (EC 1.3.1.109); short-chain acyl-CoA dehydrogenase (subunit 1/2) (EC 1.3.8.1) from Acidaminococcus fermentans (see paper)
29% identity, 94% coverage of query (123 bits)
ACADS_RAT / P15651 Short-chain specific acyl-CoA dehydrogenase, mitochondrial; SCAD; Butyryl-CoA dehydrogenase; EC 1.3.8.1 from Rattus norvegicus (Rat) (see 2 papers)
P15651 short-chain acyl-CoA dehydrogenase (EC 1.3.8.1) from Rattus norvegicus (see 2 papers)
30% identity, 81% coverage of query (123 bits)
7y0aC / P16219 Crystal structure of human short-chain acyl-coa dehydrogenase
30% identity, 90% coverage of query (122 bits)
ACADS / P16219 short-chain acyl-CoA dehydrogenase monomer (EC 1.3.8.1) from Homo sapiens (see 11 papers)
ACADS_HUMAN / P16219 Short-chain specific acyl-CoA dehydrogenase, mitochondrial; SCAD; Butyryl-CoA dehydrogenase; EC 1.3.8.1 from Homo sapiens (Human) (see 4 papers)
30% identity, 90% coverage of query (122 bits)
acdA / J7TF92 cinnamate reductase monomer (EC 1.3.8.15) from Clostridium sporogenes (strain ATCC 15579) (see 6 papers)
ACDA_CLOS1 / J7TF92 3-(aryl)acrylate reductase; EC 1.3.8.15 from Clostridium sporogenes (strain ATCC 15579) (see paper)
J7TF92 3-(aryl)acrylate reductase (EC 1.3.8.15) from Clostridium sporogenes (see paper)
30% identity, 82% coverage of query (122 bits)
7y0bA Crystal structure of human short-chain acyl-coa dehydrogenase
30% identity, 90% coverage of query (122 bits)
1jqiA Crystal structure of rat short chain acyl-coa dehydrogenase complexed with acetoacetyl-coa
30% identity, 81% coverage of query (122 bits)
8sgsA Short-chain specific acyl-CoA dehydrogenase, mitochondrial
30% identity, 90% coverage of query (122 bits)
Psest_2440 isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas stutzeri RCH2
29% identity, 93% coverage of query (121 bits)
PfGW456L13_2985 isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens GW456-L13
30% identity, 93% coverage of query (121 bits)
2pg0A / Q5L0D5 Crystal structure of acyl-coa dehydrogenase from geobacillus kaustophilus
26% identity, 92% coverage of query (121 bits)
2vigB Crystal structure of human short-chain acyl coa dehydrogenase
30% identity, 90% coverage of query (120 bits)
D4QEZ8 short-chain acyl-CoA dehydrogenase (EC 1.3.8.1) from Homo sapiens (see paper)
30% identity, 90% coverage of query (119 bits)
IPDE2_MYCS2 / A0R502 Acyl-CoA dehydrogenase IpdE2; 5OH-HIP-CoA dehydrogenase beta subunit; EC 1.3.99.- from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
29% identity, 93% coverage of query (119 bits)
ACADL_RAT / P15650 Long-chain specific acyl-CoA dehydrogenase, mitochondrial; LCAD; EC 1.3.8.8 from Rattus norvegicus (Rat) (see 3 papers)
27% identity, 92% coverage of query (118 bits)
ACDA_BACSU / P45867 Acyl-CoA dehydrogenase; EC 1.3.99.- from Bacillus subtilis (strain 168) (see paper)
acdA / GB|CAA89868.1 acyl-CoA dehydrogenase; EC 1.3.99.3 from Bacillus subtilis (see paper)
26% identity, 94% coverage of query (117 bits)
AO353_25670 isobutyryl-CoA dehydrogenase (EC 1.3.8.5) from Pseudomonas fluorescens FW300-N2E3
30% identity, 93% coverage of query (117 bits)
Shewana3_1672 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella sp. ANA-3
26% identity, 92% coverage of query (116 bits)
CARC_ACEWD / H6LGM6 Caffeyl-CoA reductase-Etf complex subunit CarC; Caffeoyl-CoA reductase CarC; NADH-dependent caffeyl-CoA reduction; EC 1.3.1.108 from Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655 / WB1) (see paper)
H6LGM6 caffeoyl-CoA reductase (subunit 3/3) (EC 1.3.1.108) from Acetobacterium woodii (see paper)
6fahD / H6LGM6 Molecular basis of the flavin-based electron-bifurcating caffeyl-coa reductase reaction (see paper)
28% identity, 91% coverage of query (116 bits)
ACADL_MOUSE / P51174 Long-chain specific acyl-CoA dehydrogenase, mitochondrial; LCAD; EC 1.3.8.8 from Mus musculus (Mouse) (see 2 papers)
P51174 long-chain acyl-CoA dehydrogenase (EC 1.3.8.8) from Mus musculus (see paper)
26% identity, 92% coverage of query (116 bits)
ACADS_BOVIN / Q3ZBF6 Short-chain specific acyl-CoA dehydrogenase, mitochondrial; SCAD; Butyryl-CoA dehydrogenase; EC 1.3.8.1 from Bos taurus (Bovine) (see paper)
29% identity, 89% coverage of query (116 bits)
PP_2216 / Q88KS3 short-chain acyl-CoA dehydrogenase monomer (EC 1.3.8.1) from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
29% identity, 80% coverage of query (115 bits)
H16_B2555 / Q0JY37 medium-chain acyl-CoA dehydrogenase (EC 1.3.8.7) from Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) (see paper)
29% identity, 94% coverage of query (115 bits)
mmgC / GI|1303933 acyl-CoA dehydrogenase from Bacillus subtilis (see paper)
28% identity, 91% coverage of query (115 bits)
ACDB_BACSU / P45857 Acyl-CoA dehydrogenase; EC 1.3.99.- from Bacillus subtilis (strain 168) (see paper)
28% identity, 91% coverage of query (114 bits)
ACDS_CLOAB / P52042 Acyl-CoA dehydrogenase, short-chain specific; Butyryl-CoA dehydrogenase; SCAD; EC 1.3.8.1 from Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) (see paper)
bcd butyryl-CoA dehydrogenase; EC 1.3.99.2 from Clostridium acetobutylicum (see paper)
28% identity, 92% coverage of query (114 bits)
ACADL / P28330 long-chain-acyl-CoA dehydrogenase monomer (EC 1.3.8.8; EC 1.3.8.7) from Homo sapiens (see 8 papers)
ACADL_HUMAN / P28330 Long-chain specific acyl-CoA dehydrogenase, mitochondrial; LCAD; EC 1.3.8.8 from Homo sapiens (Human) (see 3 papers)
27% identity, 92% coverage of query (114 bits)
5lnxD / P45857 Crystal structure of mmgc, an acyl-coa dehydrogenase from bacillus subtilis.
29% identity, 79% coverage of query (114 bits)
Sama_1362 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) from Shewanella amazonensis SB2B
26% identity, 92% coverage of query (113 bits)
ivd2 / CAC08234.1 isovaleryl-CoA dehydrogenase, partial from Solanum tuberosum (see paper)
31% identity, 81% coverage of query (113 bits)
SYN_02587 / Q2LQN9 cyclohex-1-ene-1-carbonyl-CoA dehydrogenase monomer (EC 1.3.8.10) from Syntrophus aciditrophicus (strain SB) (see paper)
CH1CO_SYNAS / Q2LQN9 Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA; EC 1.3.8.10 from Syntrophus aciditrophicus (strain SB) (see paper)
29% identity, 91% coverage of query (112 bits)
6af6A / Q5W271 Piga with fad and proline (see paper)
25% identity, 99% coverage of query (110 bits)
ACDS_MEGEL / Q06319 Acyl-CoA dehydrogenase, short-chain specific; Butyryl-CoA dehydrogenase; BCAD; SCAD; EC 1.3.8.1 from Megasphaera elsdenii (see paper)
1bucA / Q06319 Three-dimensional structure of butyryl-coa dehydrogenase from megasphaera elsdenii (see paper)
GI|149886 butyryl-CoA dehydrogenase; EC 1.3.99.2 from Megasphaera elsdenii (see 2 papers)
30% identity, 94% coverage of query (109 bits)
3pfdC / G7CNE7 Crystal structure of an acyl-coa dehydrogenase from mycobacterium thermoresistibile bound to reduced flavin adenine dinucleotide solved by combined iodide ion sad mr (see paper)
30% identity, 82% coverage of query (109 bits)
2z1qB / Q5SJW0 Crystal structure of acyl coa dehydrogenase
29% identity, 88% coverage of query (107 bits)
3mpiC / C3UVB0 Structure of the glutaryl-coenzyme a dehydrogenase glutaryl-coa complex (see paper)
28% identity, 94% coverage of query (107 bits)
3mpjB Structure of the glutaryl-coenzyme a dehydrogenase
28% identity, 94% coverage of query (107 bits)
ACD_DESML / C3UVB0 Glutaryl-CoA dehydrogenase; GDH(Des); EC 1.3.99.32 from Desulfococcus multivorans (see 2 papers)
C3UVB0 glutaryl-CoA dehydrogenase (acceptor) (EC 1.3.99.32) from Desulfococcus multivorans (see 2 papers)
28% identity, 94% coverage of query (107 bits)
8i4rA Crystal structure of acyl-coa dehydrogenase complexed with acetyl-coa from thermobifida fusca
29% identity, 82% coverage of query (107 bits)
8i4pA Crystal structure of acyl-coa dehydrogenase from thermobifida fusca
29% identity, 82% coverage of query (107 bits)
7w0jE / A0A4D5XMK4 Acyl-coa dehydrogenase, tfu_1647
29% identity, 82% coverage of query (107 bits)
6es9A / A1B5Y0 Methylsuccinyl-coa dehydrogenase of paracoccus denitrificans with bound flavin adenine dinucleotide (see paper)
27% identity, 92% coverage of query (105 bits)
4ktoA / Q92VK1 Crystal structure of a putative isovaleryl-coa dehydrogenase (psi- nysgrc-012251) from sinorhizobium meliloti 1021
28% identity, 92% coverage of query (105 bits)
6wy8C / D1AB76 Tcur3481-tcur3483 steroid acad (see paper)
30% identity, 100% coverage of query (105 bits)
1ukwB Crystal structure of medium-chain acyl-coa dehydrogenase from thermus thermophilus hb8
30% identity, 92% coverage of query (105 bits)
1ukwA / Q72JJ3 Crystal structure of medium-chain acyl-coa dehydrogenase from thermus thermophilus hb8
30% identity, 92% coverage of query (105 bits)
7szvA / A0A3E2MWC7 Crystal structure of acyl-coa dehydrogenase from mycobacterium marinum in complex with fda
30% identity, 92% coverage of query (104 bits)
6cxtB / F2K077 Crystal structure of fad-dependent dehydrogenase (see paper)
27% identity, 90% coverage of query (103 bits)
Q39QF5 cyclohex-1-ene-1-carbonyl-CoA dehydrogenase (EC 1.3.8.10) from Geobacter metallireducens (see paper)
7p9aA / Q39QF5 Structure of cyclohex-1-ene-1-carboxyl-coa dehydrogenase complexed with cyclohex-1,5-diene-1-carboxyl-coa (see paper)
28% identity, 88% coverage of query (103 bits)
7p9xA Structure of cyclohex-1-ene-1-carboxyl-coa dehydrogenase complexed with cyclohex-1-ene-1-carboxyl-coa
28% identity, 88% coverage of query (103 bits)
4m9aB / Q2T4A2 Crystal structure of acyl-coa dehydrogenase from burkholderia thailandensis e264
29% identity, 81% coverage of query (103 bits)
4iv6B / A0QTW7 X-ray crystal structure of an isovaleryl-coa dehydrogenase from mycobacterium smegmatis (see paper)
26% identity, 92% coverage of query (100 bits)
4x28D / I6Y3Q0 Crystal structure of the chse4-chse5 complex from mycobacterium tuberculosis (see paper)
26% identity, 93% coverage of query (98.6 bits)
6wy9B Tcur3481-tcur3483 steroid acad g363a variant
30% identity, 99% coverage of query (98.2 bits)
4irnA / C4NCB7 Crystal structure of the prolyl acyl carrier protein oxidase anab (see paper)
27% identity, 71% coverage of query (98.2 bits)
1rx0C Crystal structure of isobutyryl-coa dehydrogenase complexed with substrate/ligand.
26% identity, 93% coverage of query (97.8 bits)
1rx0A / Q9UKU7 Crystal structure of isobutyryl-coa dehydrogenase complexed with substrate/ligand. (see paper)
26% identity, 93% coverage of query (97.8 bits)
ACAD8_HUMAN / Q9UKU7 Isobutyryl-CoA dehydrogenase, mitochondrial; IBDH; Activator-recruited cofactor 42 kDa component; ARC42; Acyl-CoA dehydrogenase family member 8; ACAD-8; EC 1.3.8.5 from Homo sapiens (Human) (see 7 papers)
26% identity, 93% coverage of query (97.4 bits)
6cy8B Crystal structure of fad-dependent dehydrogenase
27% identity, 90% coverage of query (97.1 bits)
ACADM_DROME / Q9VSA3 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial; EC 1.3.8.7 from Drosophila melanogaster (Fruit fly) (see paper)
26% identity, 91% coverage of query (96.3 bits)
3owaC / A0A6H3ADM7 Crystal structure of acyl-coa dehydrogenase complexed with fad from bacillus anthracis
28% identity, 91% coverage of query (95.1 bits)
3sf6A / A0QV68 Crystal structure of glutaryl-coa dehydrogenase from mycobacterium smegmatis (see paper)
28% identity, 97% coverage of query (94.7 bits)
ACADM_PIG / P41367 Medium-chain specific acyl-CoA dehydrogenase, mitochondrial; MCAD; EC 1.3.8.7 from Sus scrofa (Pig) (see 3 papers)
P41367 medium-chain acyl-CoA dehydrogenase (EC 1.3.8.7) from Sus scrofa (see paper)
26% identity, 92% coverage of query (94.7 bits)
3mdeA Crystal structures of medium chain acyl-coa dehydrogenase from pig liver mitochondria with and without substrate
26% identity, 92% coverage of query (94.4 bits)
3mddA / P41367 Crystal structures of medium chain acyl-coa dehydrogenase from pig liver mitochondria with and without substrate (see paper)
26% identity, 92% coverage of query (94.4 bits)
1udyA Medium-chain acyl-coa dehydrogenase with 3-thiaoctanoyl-coa
26% identity, 92% coverage of query (94.4 bits)
ChsE5 / I6Y3Q0 3-oxocholest-4-en-26-oyl-CoA dehydrogenase β subunit from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
CHSE5_MYCTU / I6Y3Q0 Acyl-CoA dehydrogenase FadE27; ACAD; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase beta subunit; EC 1.3.99.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 3 papers)
26% identity, 93% coverage of query (94.0 bits)
8pheA / Q9H845 Acad9-wt in complex with ecsit-cter (see paper)
28% identity, 83% coverage of query (94.0 bits)
ACAD9_HUMAN / Q9H845 Complex I assembly factor ACAD9, mitochondrial; Acyl-CoA dehydrogenase family member 9; ACAD-9; EC 1.3.8.- from Homo sapiens (Human) (see 14 papers)
28% identity, 83% coverage of query (93.6 bits)
8phfA Cryo-em structure of human acad9-s191a
28% identity, 83% coverage of query (93.2 bits)
3swoA / A0R6V6 Crystal structure of a glutaryl-coa dehydrogenase from mycobacterium smegmatis in complex with fadh2 (see paper)
28% identity, 72% coverage of query (92.8 bits)
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