Searching for up to 100 curated homologs for GFF3998 FitnessBrowser__psRCH2:GFF3998 (641 a.a.)
Found high-coverage hits (≥70%) to 4 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
DSD_PSEPK / Q88JU3 3-dehydroshikimate dehydratase; DSD; EC 4.2.1.118 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
73% identity, 98% coverage of query (920 bits)
5hmqD / Q88JU3 Xylose isomerase-like tim barrel/4-hydroxyphenylpyruvate dioxygenase fusion protein
72% identity, 98% coverage of query (902 bits)
DSD_PSEAE / Q9I6P6 3-dehydroshikimate dehydratase; DSD; EC 4.2.1.118 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
71% identity, 98% coverage of query (870 bits)
qsuB / A4QB63 dehydroshikimate dehydratase (EC 4.2.1.118) from Corynebacterium glutamicum (strain R) (see paper)
42% identity, 98% coverage of query (427 bits)
Build an alignment for GFF3998 and 4 homologs with ≥ 30% identity
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No additional hits (below 30% identity) were found
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Lawrence Berkeley National Laboratory