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Searching for up to 100 curated homologs for GFF4052 FitnessBrowser__psRCH2:GFF4052 (154 a.a.)

Found high-coverage hits (≥70%) to 6 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Gcv / b2904 glycine cleavage system H protein from Escherichia coli K-12 substr. MG1655 (see 11 papers)
gcvH / P0A6T9 glycine cleavage system H protein from Escherichia coli (strain K12) (see 9 papers)
GCSH_ECOLI / P0A6T9 Glycine cleavage system H protein from Escherichia coli (strain K12) (see paper)
P0A6T9 glycine cleavage system (subunit 2/3) (EC 1.4.1.27) from Escherichia coli (see paper)
    37% identity, 70% coverage of query (83.6 bits)

3ab9A / P0A6T9 Crystal structure of lipoylated e. Coli h-protein (reduced form) (see paper)
    37% identity, 70% coverage of query (83.2 bits)

GCSH_THET8 / Q5SKW9 Glycine cleavage system H protein from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see paper)
    36% identity, 84% coverage of query (79.3 bits)

gcvH / P73560 glycine cleavage system H-protein (EC 1.4.1.27) from Synechocystis sp. (strain PCC 6803 / Kazusa) (see 2 papers)
    38% identity, 75% coverage of query (75.9 bits)

GCSH_BACSU / O32174 Glycine cleavage system H protein; Octanoyl/lipoyl carrier protein from Bacillus subtilis (strain 168) (see paper)
    30% identity, 74% coverage of query (65.5 bits)

Build an alignment

Build an alignment for GFF4052 and 5 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

GCSH_SCHPO / Q9HDV9 Putative glycine cleavage system H protein, mitochondrial; Glycine decarboxylase complex subunit H from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
    25% identity, 72% coverage of query (50.1 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory