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Searching for up to 100 curated homologs for GFF4068 Psest_4141 3-carboxymuconate cyclase (397 a.a.)

Found high-coverage hits (≥70%) to 6 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

PfGW456L13_3314 D-galactono-lactonase (EC 3.1.1.-) from Pseudomonas fluorescens GW456-L13
    51% identity, 98% coverage of query (370 bits)

PLH9_FORAG / T2KMF9 6-phosphogluconolactonase; P9_lactonase; Polysaccharide utilization locus H protein P9; PUL H protein P9; EC 3.1.1.31 from Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) (see paper)
    31% identity, 90% coverage of query (173 bits)

6PGL_BACSU / O34499 6-phosphogluconolactonase; EC 3.1.1.31 from Bacillus subtilis (strain 168) (see paper)
    31% identity, 89% coverage of query (154 bits)

Build an alignment

Build an alignment for GFF4068 and 3 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

Pgl / b0767 6-phosphogluconolactonase (EC 3.1.1.31) from Escherichia coli K-12 substr. MG1655 (see 8 papers)
pgl / P52697 6-phosphogluconolactonase (EC 3.1.1.31) from Escherichia coli (strain K12) (see 8 papers)
6PGL_ECOLI / P52697 6-phosphogluconolactonase; 6-P-gluconolactonase; Pgl; EC 3.1.1.31 from Escherichia coli (strain K12) (see paper)
    29% identity, 70% coverage of query (107 bits)

HSERO_RS15795 galactaro-1,5-lactonase from Herbaspirillum seropedicae SmR1
    29% identity, 86% coverage of query (87.4 bits)

BAE53439.1 L-alpha-hydroxyglutaric acid gamma-lactonase from Pantoea cypripedii (see paper)
    26% identity, 75% coverage of query (84.3 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory