Searching for up to 100 curated homologs for GFF4625 FitnessBrowser__WCS417:GFF4625 (96 a.a.)
Found high-coverage hits (≥70%) to 13 curated proteins.
Removed hits that are identical to the query, leaving 12
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
PfGW456L13_3823 Muconolactone isomerase (EC 5.3.3.4) from Pseudomonas fluorescens GW456-L13
88% identity, 100% coverage of query (183 bits)
catC / A0F0B4 muconolactone isomerase (EC 5.3.3.4) from Pseudomonas reinekei (see paper)
84% identity, 100% coverage of query (174 bits)
catC / P00948 muconolactone isomerase subunit (EC 5.3.3.4) from Pseudomonas putida (see 3 papers)
CATC_PSEPU / P00948 Muconolactone Delta-isomerase; MIase; EC 5.3.3.4 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see paper)
77% identity, 100% coverage of query (162 bits)
catC2 / BAA75212.1 muconolactone isomerase from Frateuria sp. ANA-18 (see paper)
73% identity, 100% coverage of query (150 bits)
catCI / BAA75206.1 muconolactone isomerase from Frateuria sp. ANA-18 (see paper)
catC1 / BAC82533.1 muconolactone isomerase from Frateuria sp. ANA-18 (see 3 papers)
60% identity, 99% coverage of query (125 bits)
catC / AAC46431.1 muconolactone isomerase from Acinetobacter baylyi (see 8 papers)
59% identity, 99% coverage of query (125 bits)
catC / P80573 muconolactone isomerase monomer (EC 5.3.3.4) from Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (see paper)
CATC_CUPPJ / P80573 Muconolactone Delta-isomerase; MIase; EC 5.3.3.4 from Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Cupriavidus necator (strain JMP 134)) (see paper)
60% identity, 95% coverage of query (113 bits)
mmlJ / Q471R4 methylmuconolactone isomerase monomer (EC 5.3.3.4) from Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (see 2 papers)
mmlJ / CAA67959.1 methylmuconolactone isomerase from Cupriavidus necator (see paper)
56% identity, 95% coverage of query (110 bits)
catC / BAE46389.1 muconolactone isomerase from Rhodococcus sp. AN-22 (see paper)
53% identity, 94% coverage of query (110 bits)
clcF / Q8G9L0 5-chloromuconolactone dehalogenase monomer from Rhodococcus opacus (see 2 papers)
50% identity, 98% coverage of query (107 bits)
3zo7B / Q8G9L0 Crystal structure of clcfe27a with substrate (see paper)
49% identity, 98% coverage of query (105 bits)
C5MR75 muconolactone DELTA-isomerase (EC 5.3.3.4) from Pseudomonas reinekei (see paper)
51% identity, 95% coverage of query (84.0 bits)
Build an alignment for GFF4625 and 12 homologs with ≥ 30% identity
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Lawrence Berkeley National Laboratory