Sites on a Tree

 

Searching for up to 100 curated homologs for GFF6023 (75 a.a.)

Found high-coverage hits (≥70%) to 2 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

tusA / D3RPC0 TusA sulfur-carrier protein from Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) (see 2 papers)
TUSA_ALLVD / D3RPC0 Sulfur carrier protein TusA from Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) (Chromatium vinosum) (see 2 papers)
    63% identity, 95% coverage of query (103 bits)

tusA / P0A890 sulfur transfer protein TusA from Escherichia coli (strain K12) (see 12 papers)
TUSA_ECOLI / P0A890 Sulfur carrier protein TusA; Sulfur mediator TusA; Sulfur transfer protein TusA; tRNA 2-thiouridine synthesizing protein A from Escherichia coli (strain K12) (see 4 papers)
TUSA_ECO57 / P0A892 Sulfur carrier protein TusA; Sulfur mediator TusA; Sulfur transfer protein TusA; tRNA 2-thiouridine synthesizing protein A from Escherichia coli O157:H7 (see paper)
tusA sulfurtransferase TusA; EC 2.8.1; EC 2.8.1.- from Escherichia coli K12 (see 7 papers)
    31% identity, 95% coverage of query (53.9 bits)

Build an alignment

Build an alignment for GFF6023 and 2 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory