Searching for up to 100 curated homologs for GFF715 FitnessBrowser__Phaeo:GFF715 (316 a.a.)

Found high-coverage hits (≥70%) to 14 curated proteins.

Removed hits that are identical to the query, leaving 13

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

4ru1A / A0LVW8 Crystal structure of carbohydrate transporter acei_1806 from acidothermus cellulolyticus 11b, target efi-510965, in complex with myo-inositol
    32% identity, 88% coverage of query (136 bits)

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Build an alignment for GFF715 and 1 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

3c6qC Apo and ligand-bound form of a thermophilic glucose/xylose binding protein
    26% identity, 84% coverage of query (104 bits)

2h3hA / Q9WXW9 Crystal structure of the liganded form of thermotoga maritima glucose binding protein (see paper)
    27% identity, 84% coverage of query (103 bits)

XYLF_SULAC / Q4J710 Xylose/arabinose-binding protein XylF; D-xylose/L-arabinose substrate binding protein; SBP from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) (see paper)
Q4J710 ABC-type D-xylose/L-arabinose transporter (subunit 1/2) (EC 7.5.2.13) from Sulfolobus acidocaldarius (see paper)
    25% identity, 87% coverage of query (73.2 bits)

6gt9A / W8QN64 Crystal structure of ganp, a glucose-galactose binding protein from geobacillus stearothermophilus, in complex with galactose
    23% identity, 80% coverage of query (72.8 bits)

6guqA Crystal structure of ganp, a glucose-galactose binding protein from geobacillus stearothermophilus, in complex with glucose
    23% identity, 78% coverage of query (71.2 bits)

TC 3.A.1.2.20 / G4FGN5 LacI family transcriptional regulator, component of Glucose porter. Also bind xylose (Boucher and Noll 2011). Induced by glucose (Frock et al. 2012). Directly regulated by glucose-responsive regulator GluR from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
    24% identity, 86% coverage of query (64.3 bits)

7x0hA / A3DCF2 Crystal structure of sugar binding protein cbpa complexed wtih glucose from clostridium thermocellum (see paper)
    24% identity, 88% coverage of query (62.4 bits)

5xssA / A6LW07 Xylfii molecule (see paper)
    22% identity, 79% coverage of query (58.2 bits)

5hqjA / B1G1H7 Crystal structure of abc transporter solute binding protein b1g1h7 from burkholderia graminis c4d1m, target efi-511179, in complex with d-arabinose
    24% identity, 83% coverage of query (49.7 bits)

5dkvA / B9K0T2 Crystal structure of an abc transporter solute binding protein from agrobacterium vitis(avis_5339, target efi-511225) bound with alpha-d- tagatopyranose
    24% identity, 82% coverage of query (47.4 bits)

4rxmA Crystal structure of periplasmic abc transporter solute binding protein a7jw62 from mannheimia haemolytica phl213, target efi-511105, in complex with myo-inositol
    24% identity, 74% coverage of query (43.1 bits)

4rxmB Crystal structure of periplasmic abc transporter solute binding protein a7jw62 from mannheimia haemolytica phl213, target efi-511105, in complex with myo-inositol
    24% identity, 74% coverage of query (43.1 bits)

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