Sites on a Tree

 

Searching for up to 100 curated homologs for GFF72 FitnessBrowser__psRCH2:GFF72 (384 a.a.)

Found high-coverage hits (≥70%) to 2 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

AFA35120.1 β-galactosidase (BgalH) (EC 3.2.1.23) (see protein)
    62% identity, 97% coverage of query (445 bits)

Build an alignment

Build an alignment for GFF72 and 1 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

6z1mA Structure of an ancestral glycosidase (family 1) bound to heme (see paper)
    23% identity, 84% coverage of query (49.3 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory