Searching for up to 100 curated homologs for GFF780 FitnessBrowser__Phaeo:GFF780 (325 a.a.)
Found high-coverage hits (≥70%) to 11 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
Dshi_3123 Tricarboxylate transport protein TctC from Dinoroseobacter shibae DFL-12
78% identity, 100% coverage of query (483 bits)
TC 2.A.80.1.4 / S5XTE7 Citrate uptake transporter, substrate binding protein, component of Pmf-dependent citrate uptake porter, TctABC from Corynebacterium glutamicum MB001
34% identity, 91% coverage of query (178 bits)
HP15_2661 Citrate uptake transporter, substrate-binding component TctC from Marinobacter adhaerens HP15
36% identity, 90% coverage of query (176 bits)
Build an alignment for GFF780 and 3 homologs with ≥ 30% identity
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TC 2.A.80.1.1 / Q9FA46 TctC aka STM2786, component of The tricarboxylate transporter, TctABC from Salmonella enterica (see paper)
25% identity, 94% coverage of query (117 bits)
8hkbA / A0A0K8P8D2 Tpa bound-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis mutant k184d (see paper)
28% identity, 81% coverage of query (87.0 bits)
tphCII / BAE47084.1 periplasmic terephthalate binding receptor from Comamonas sp. E6 (see paper)
26% identity, 74% coverage of query (67.4 bits)
TC 2.A.80.1.2 / Q5D0X7 Terephthalate permease, component of Terephthalate (TPA) aromatic acid uptake transport system, TpiBA/TphC from Comamonas testosteroni
24% identity, 97% coverage of query (63.2 bits)
2f5xB / Q7VTS1 Structure of periplasmic binding protein bugd (see paper)
25% identity, 78% coverage of query (61.2 bits)
6hkeB / Q6N446 Matc (rpa3494) from rhodopseudomonas palustris with bound malate (see paper)
24% identity, 77% coverage of query (52.8 bits)
5oeiA / Q6N193 R. Palustris rpa4515 with oxoadipate (see paper)
26% identity, 77% coverage of query (52.0 bits)
5okuA R. Palustris rpa4515 with adipate
26% identity, 77% coverage of query (52.0 bits)
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Lawrence Berkeley National Laboratory