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Searching for up to 100 curated homologs for GFF849 FitnessBrowser__psRCH2:GFF849 (395 a.a.)

Found high-coverage hits (≥70%) to 100 curated proteins.

Removed hits that are identical to the query, leaving 99

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

MalE / b4034 maltose ABC transporter periplasmic binding protein (EC 7.5.2.1) from Escherichia coli K-12 substr. MG1655 (see 50 papers)
MalE / P0AEX9 maltose ABC transporter periplasmic binding protein (EC 7.5.2.1) from Escherichia coli (strain K12) (see 74 papers)
MALE_ECOLI / P0AEX9 Maltose/maltodextrin-binding periplasmic protein; MMBP; Maltodextrin-binding protein; Maltose-binding protein; MBP from Escherichia coli (strain K12) (see 5 papers)
P0AEX9 ABC-type maltose transporter (subunit 1/4) (EC 7.5.2.1) from Escherichia coli (see paper)
P0AEY0 single-stranded DNA cytosine deaminase (EC 3.5.4.38) from Escherichia coli O157:H7 (see paper)
TC 3.A.1.1.1 / P0AEX9 Maltose-binding periplasmic protein MalE aka B4034, component of Maltooligosaccharide porter. The 3-D structure has been reported by Oldham et al. (2007). An altering access mechanism has been suggested for the maltose transporter resulting from rigid-body rotations (Khare et al., 2009). Bordignon et al. (2010) and Schneider et al. (2012) have reviewed the extensive knowledge available on MalEFGK2, its mode of action and its regulatory interactions from Escherichia coli (see 12 papers)
malE / RF|NP_418458 maltose-binding periplasmic protein from Escherichia coli K12 (see 14 papers)
    57% identity, 98% coverage of query (448 bits)

4xajB / P0AEX9,Q9Y466 Crystal structure of human nr2e1/tlx (see paper)
    58% identity, 93% coverage of query (442 bits)

1llsA Crystal structure of unliganded maltose binding protein with xenon
    58% identity, 93% coverage of query (442 bits)

1ez9B Structure of maltotetraitol bound to open-form maltodextrin binding protein in p1 crystal form
    58% identity, 93% coverage of query (442 bits)

6k7fA / P0AEX9,P53220 Crystal structure of mbpholo-tim21 fusion protein with a 17-residue helical linker (see paper)
    58% identity, 93% coverage of query (441 bits)

3jyrA Crystal structures of the gach receptor of streptomyces glaucescens gla.O in the unliganded form and in complex with acarbose and an acarbose homolog. Comparison with acarbose-loaded maltose binding protein of salmonella typhimurium.
    58% identity, 93% coverage of query (441 bits)

5azaA / I6V0B8,P0AEX9 Crystal structure of mbp-saglb fusion protein with a 20-residue spacer in the connector helix (see paper)
    58% identity, 93% coverage of query (440 bits)

4my2A / P0AEX9,Q00604 Crystal structure of norrin in fusion with maltose binding protein (see paper)
    58% identity, 92% coverage of query (440 bits)

7uajB / P03126,P0AEX9 Crystal structure of apo hpv16 e6
    58% identity, 92% coverage of query (440 bits)

5z0rB / P0AEX9,Q32ZE1 Structural insight into the zika virus capsid encapsulating the viral genome (see paper)
    58% identity, 93% coverage of query (440 bits)

4xaiA / P0AEY0,Q9NCL0 Crystal structure of red flour beetle nr2e1/tlx (see paper)
    58% identity, 92% coverage of query (440 bits)

4xajC Crystal structure of human nr2e1/tlx
    58% identity, 92% coverage of query (440 bits)

4pqkB / B1B3N6,P0AEX9 C-terminal domain of DNA binding protein (see paper)
    58% identity, 92% coverage of query (439 bits)

5az7A / P0AEX9,Q62760 Crystal structure of mbp-tom20 fusion protein with a 4-residue spacer in the connector helix (see paper)
    58% identity, 93% coverage of query (439 bits)

8h68A / P0AEX9,Q8MNT9 Crystal structure of caenorhabditis elegans nmad-1 in complex with nog and mg(ii) (see paper)
    58% identity, 92% coverage of query (439 bits)

6m4wA Crystal structure of mbp fused split fkbp-frb t2098l mutant in complex with rapamycin
    59% identity, 92% coverage of query (439 bits)

5cfvA / P0AEX9 Fusion of maltose-binding protein and pila from acinetobacter nosocomialis m2 (see paper)
    58% identity, 92% coverage of query (438 bits)

5jonA / O88703,P0AEY0 Crystal structure of the unliganded form of hcn2 cnbd (see paper)
    58% identity, 92% coverage of query (438 bits)

4b3nA / P0AEX9,Q0PF16 Crystal structure of rhesus trim5alpha pry/spry domain (see paper)
    58% identity, 93% coverage of query (438 bits)

6anvA / L7P7M1,P0AEX9 Crystal structure of anti-crispr protein acrf1 (see paper)
    58% identity, 93% coverage of query (438 bits)

6zhoA / O60894,P0AEX9,Q16602 Crystal structure of a cgrp receptor ectodomain heterodimer with bound high affinity inhibitor (see paper)
    58% identity, 92% coverage of query (438 bits)

7p0iA Crystal structure of a cgrp receptor ectodomain heterodimer bound to macrocyclic inhibitor compound 13
    58% identity, 92% coverage of query (438 bits)

8el0A Structure of mbp-mcl-1 in complex with a macrocyclic compound
    58% identity, 92% coverage of query (438 bits)

8ax6A Crystal structure of a cgrp receptor ectodomain heterodimer bound to macrocyclic inhibitor htl0029882
    58% identity, 92% coverage of query (438 bits)

8ax7A Crystal structure of a cgrp receptor ectodomain heterodimer bound to macrocyclic inhibitor htl0031448
    58% identity, 92% coverage of query (438 bits)

8g3sA / Q07820 Mbp-mcl1 in complex with ligand 11 (see paper)
    58% identity, 92% coverage of query (437 bits)

7wr3A / A0A0H2US87,P0AEX9 Crystal structure of mbp-fused ospc3 in complex with calmodulin (see paper)
    59% identity, 90% coverage of query (437 bits)

3csbA / P0AEX9 Crystal structure of monobody ysx1/maltose binding protein fusion complex (see paper)
    58% identity, 93% coverage of query (437 bits)

3woaA / P03034,P0AEX9 Crystal structure of lambda repressor (1-45) fused with maltose- binding protein (see paper)
    58% identity, 92% coverage of query (437 bits)

5fsgA / P05133,P0AEX9 Structure of the hantavirus nucleoprotein provides insights into the mechanism of RNA encapsidation and a template for drug design (see paper)
    59% identity, 91% coverage of query (437 bits)

4nufA / P0AEX9,Q62227 Crystal structure of shp/eid1 (see paper)
    58% identity, 92% coverage of query (437 bits)

2vgqA / P0AEX9,Q7Z434 Crystal structure of human ips-1 card (see paper)
    58% identity, 92% coverage of query (437 bits)

8qsoA Crystal structure of human mcl-1 in complex with compound 1
    58% identity, 92% coverage of query (437 bits)

8g3xA Mbp-mcl1 in complex with ligand 32
    58% identity, 92% coverage of query (437 bits)

8g3wA Mbp-mcl1 in complex with ligand 28
    58% identity, 92% coverage of query (437 bits)

8g3uA Mbp-mcl1 in complex with ligand 21
    58% identity, 92% coverage of query (437 bits)

8g3tA Mbp-mcl1 in complex with ligand 12
    58% identity, 92% coverage of query (437 bits)

8ax5A Crystal structure of a cgrp receptor ectodomain heterodimer bound to macrocyclic inhibitor htl0029881
    58% identity, 92% coverage of query (437 bits)

5w1cA Crystal structure of mbp fused activation-induced cytidine deaminase (aid) in complex with cytidine
    58% identity, 92% coverage of query (437 bits)

7p0fA Crystal structure of a cgrp receptor ectodomain heterodimer bound to macrocyclic inhibitor htl0028125
    58% identity, 92% coverage of query (437 bits)

5tj2D Gasdermin-b c-terminal domain containing the polymorphism residues gly299:ser306 fused to maltose binding protein
    59% identity, 90% coverage of query (437 bits)

5tj4E / Q8TAX9 Gasdermin-b c-terminal domain containing the polymorphism residues gly299:pro306 fused to maltose binding protein (see paper)
    59% identity, 90% coverage of query (436 bits)

1r6zZ / P0AEX9,Q9VUQ5 The crystal structure of the argonaute2 paz domain (as a mbp fusion) (see paper)
    58% identity, 92% coverage of query (436 bits)

6pfoA / P30988 Crystal structure of n-glycosylated human calcitonin receptor extracellular domain in complex with salmon calcitonin (16-32) (see paper)
    58% identity, 93% coverage of query (436 bits)

3ob4A / A5Z1Q8,P0AEX9 Mbp-fusion protein of the major peanut allergen ara h 2 (see paper)
    59% identity, 90% coverage of query (436 bits)

3vd8A / O14862,P0AEY0 Crystal structure of human aim2 pyd domain with mbp fusion (see paper)
    59% identity, 90% coverage of query (436 bits)

6x91A / P0AEX9,P41238 Crystal structure of mbp-fused human apobec1 (see paper)
    58% identity, 92% coverage of query (436 bits)

6sjvA / A0A376KDN7,P06463,Q05086 Structure of hpv18 e6 oncoprotein in complex with mutant e6ap lxxll motif
    59% identity, 90% coverage of query (436 bits)

4rwfA / O60895,P0AEX9,Q16602 Crystal structure of the clr:ramp2 extracellular domain heterodimer with bound adrenomedullin (see paper)
    58% identity, 92% coverage of query (436 bits)

5y2gA / P09879,P0AEX9 Structure of mbp tagged gbs camp (see paper)
    59% identity, 90% coverage of query (436 bits)

7cy6A / A0A2K3D5Z7,P0AEX9 Crystal structure of cmd1 in complex with 5mc-DNA (see paper)
    59% identity, 90% coverage of query (436 bits)

3c4mA Structure of human parathyroid hormone in complex with the extracellular domain of its g-protein-coupled receptor (pth1r)
    58% identity, 92% coverage of query (436 bits)

4wthB Ataxin-3 carboxy terminal region - crystal c2 (triclinic)
    58% identity, 92% coverage of query (436 bits)

4rwgA Crystal structure of the clr:ramp1 extracellular domain heterodimer with bound high affinity cgrp analog
    58% identity, 92% coverage of query (436 bits)

6x91B Crystal structure of mbp-fused human apobec1
    58% identity, 92% coverage of query (436 bits)

4rwgB Crystal structure of the clr:ramp1 extracellular domain heterodimer with bound high affinity cgrp analog
    58% identity, 92% coverage of query (436 bits)

1ytvA Maltose-binding protein fusion to a c-terminal fragment of the v1a vasopressin receptor
    58% identity, 92% coverage of query (436 bits)

3rumA New strategy to analyze structures of glycopeptide antibiotic-target complexes
    58% identity, 92% coverage of query (436 bits)

8c5lB / P0AEX9,P10588 Nr2f6 ligand binding domain in complex with nsd1 peptide
    59% identity, 90% coverage of query (435 bits)

4ikmA / P0AEX9,Q9Y2G2 X-ray structure of card8 card domain (see paper)
    59% identity, 90% coverage of query (435 bits)

BWI76_RS01830 maltose ABC transporter, substrate-binding component MalE from Klebsiella michiganensis M5al
    55% identity, 98% coverage of query (435 bits)

5h7qA / P0AEX9,P41218 Crystal structure of human mnda pyd domain with mbp tag (see paper)
    59% identity, 90% coverage of query (435 bits)

4irlB / B0V1H4,P0AEX9 X-ray structure of the card domain of zebrafish gbp-nlrp1 like protein (see paper)
    59% identity, 90% coverage of query (435 bits)

5t05B / P0AEX9 Crystal structure of heparan sulfate 6-o-sulfotransferase with bound pap and idoa2s containing hexasaccharide substrate (see paper)
    59% identity, 90% coverage of query (435 bits)

3oaiA / P0AEX9,P25189 Crystal structure of the extra-cellular domain of human myelin protein zero (see paper)
    58% identity, 93% coverage of query (435 bits)

5gppB / P0AEX9,Q9I9N6 Crystal structure of zebrafish asc pyd domain (see paper)
    59% identity, 90% coverage of query (435 bits)

6slmA / P0AEX9,P17386,Q05086 Crystal structure of full-length hpv31 e6 oncoprotein in complex with lxxll peptide of ubiquitin ligase e6ap (see paper)
    59% identity, 90% coverage of query (435 bits)

3n96A / P0AEX9,Q13324 Crystal structure of human crfr2 alpha extracellular domain in complex with urocortin 1
    58% identity, 92% coverage of query (435 bits)

3n94A / P0AEX9,P41586 Crystal structure of human pituitary adenylate cyclase 1 receptor- short n-terminal extracellular domain (see paper)
    58% identity, 92% coverage of query (435 bits)

4xa2A / P0AEX9 Structure of the major type iv pilin of acinetobacter baumannii
    59% identity, 90% coverage of query (435 bits)

3h4zA / P0AEX9,P49273 Crystal structure of an mbp-der p 7 fusion protein (see paper)
    59% identity, 90% coverage of query (435 bits)

4tsmB / P0AEX9 Mbp-fusion protein of pila1 from c. Difficile r20291 residues 26-166 (see paper)
    59% identity, 90% coverage of query (434 bits)

4exkA / A0A0F6B1U8,P0AEX9 A chimera protein containing mbp fused to thE C-terminal domain of the uncharacterized protein stm14_2015 from salmonella enterica
    59% identity, 91% coverage of query (434 bits)

5hz7A / P0AEX9 High-resolution crystal structure of the minor DNA-binding pilin comp from neisseria meningitidis in fusion with mbp (see paper)
    59% identity, 90% coverage of query (434 bits)

4h1gA / C4YKK8,P0AEX9 Structure of candida albicans kar3 motor domain fused to maltose- binding protein (see paper)
    58% identity, 90% coverage of query (434 bits)

3py7A / P06931,P0AEX9 Crystal structure of full-length bovine papillomavirus oncoprotein e6 in complex with ld1 motif of paxillin at 2.3a resolution (see paper)
    59% identity, 90% coverage of query (434 bits)

5w0rA / P0AEX9,Q9GZX7 Crystal structure of mbp fused activation-induced cytidine deaminase (aid) in complex with cacodylic acid (see paper)
    59% identity, 90% coverage of query (434 bits)

3l2jA / P0AEX9,Q03431 Dimeric structure of the ligand-free extracellular domain of the human parathyroid hormone receptor (pth1r) (see paper)
    58% identity, 92% coverage of query (434 bits)

6d67A / P0AEX9,P28562 Crystal structure of the human dual specificity phosphatase 1 catalytic domain (c258s) as a maltose binding protein fusion (maltose bound form) in complex with the designed ar protein mbp3_16 (see paper)
    59% identity, 90% coverage of query (434 bits)

5jstB / A6ZQL5,P0AEX9 Mbp fused mdv1 coiled coil (see paper)
    59% identity, 90% coverage of query (434 bits)

3a3cA / P0AEX9,P36046 Crystal structure of tim40/mia40 fusing mbp, c296s and c298s mutant (see paper)
    58% identity, 92% coverage of query (434 bits)

1y4cA / P0AEX9 Designed helical protein fusion mbp (see paper)
    58% identity, 91% coverage of query (434 bits)

6smvA / P0AEX9,P36813,Q92585 Structure of hpv49 e6 protein in complex with maml1 lxxll motif
    59% identity, 90% coverage of query (434 bits)

5w0uB Crystal structure of mbp fused activation-induced cytidine deaminase (aid) in complex with dcmp
    59% identity, 90% coverage of query (434 bits)

5w0uA Crystal structure of mbp fused activation-induced cytidine deaminase (aid) in complex with dcmp
    59% identity, 90% coverage of query (434 bits)

6xdjA / P22579 Crystal structure analysis of mbp-sin3
    59% identity, 90% coverage of query (433 bits)

6xrxA / P0AEX9,Q8T5C5 Crystal structure of the mosquito protein az1 as an mbp fusion (see paper)
    59% identity, 90% coverage of query (433 bits)

6ki0A / P0AEX9,Q9ULZ3 Crystal structure of human asc-card (see paper)
    59% identity, 90% coverage of query (433 bits)

6i4yA / O43715,P0AEX9 X-ray structure of the human mitochondrial prelid3b-triap1 complex (see paper)
    59% identity, 90% coverage of query (433 bits)

8iiyA / C3SHQ8,O95619 Crystal structure of mbp fused gas41 yeats domain in complex with h3k14ac peptide (see paper)
    59% identity, 92% coverage of query (433 bits)

5h7nB / P0AEX9,P59046 Crystal structure of human nlrp12-pyd with a mbp tag (see paper)
    59% identity, 90% coverage of query (433 bits)

5gpqA / P0AEX9,Q9I9N6 Crystal structure of zebrafish asc card domain (see paper)
    59% identity, 90% coverage of query (433 bits)

3dm0A / O24456,P0AEX9 Maltose binding protein fusion with rack1 from a. Thaliana (see paper)
    59% identity, 90% coverage of query (433 bits)

1hsjA / P0AEX9,Q9F0R1 Sarr mbp fusion structure (see paper)
    58% identity, 90% coverage of query (433 bits)

7kd4A / P0AEX9,Q91MK1 Structure of thE C-terminal domain of the menangle virus phosphoprotein (residues 329 -388), fused to mbp. Space group p21. (see paper)
    59% identity, 90% coverage of query (433 bits)

4ozqB / L0N7N1 Crystal structure of the mouse kif14 motor domain (see paper)
    58% identity, 90% coverage of query (433 bits)

5ygsD / P0AEX9,Q93038 Human tnfrsf25 death domain (see paper)
    59% identity, 90% coverage of query (432 bits)

3f5fA / P0AEX9,Q76KB1 Crystal structure of heparan sulfate 2-o-sulfotransferase from gallus gallus as a maltose binding protein fusion. (see paper)
    58% identity, 90% coverage of query (432 bits)

5hzvA / P0AEX9,P17813 Crystal structure of the zona pellucida module of human endoglin/cd105 (see paper)
    58% identity, 90% coverage of query (432 bits)

Build an alignment

Build an alignment for GFF849 and 99 homologs with ≥ 30% identity

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory