Searching for up to 100 curated homologs for Ga0059261_0896 FitnessBrowser__Korea:Ga0059261_0896 (272 a.a.)

Found high-coverage hits (≥70%) to 31 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

MCTE_CERS4 / D3JV05 (3S)-malyl-CoA thioesterase; (3S)-malyl-CoA thiolesterase; EC 3.1.2.30 from Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.) (Rhodobacter sphaeroides) (see paper)
D3JV05 (3S)-malyl-CoA thioesterase (EC 3.1.2.30) from Cereibacter sphaeroides (see paper)
    40% identity, 96% coverage of query (172 bits)

PGA1_c03680 (3S)-malyl-CoA thioesterase [EC:3.1.2.30] from Phaeobacter inhibens BS107
    39% identity, 96% coverage of query (165 bits)

Q037K5 citrate (pro-3S)-lyase (EC 4.1.3.6) from Lacticaseibacillus casei (see paper)
    33% identity, 96% coverage of query (116 bits)

5vxcA / Q8N0X4 Crystal structure analysis of human clybl in complex with free coash (see paper)
    31% identity, 96% coverage of query (115 bits)

CLYBL / Q8N0X4 malate/β-methylmalate synthase (EC 2.3.3.9) from Homo sapiens (see 3 papers)
CLYBL_HUMAN / Q8N0X4 Citramalyl-CoA lyase, mitochondrial; (3S)-malyl-CoA thioesterase; Beta-methylmalate synthase; Citrate lyase subunit beta-like protein; Citrate lyase beta-like; Malate synthase; EC 4.1.3.25; EC 3.1.2.30; EC 2.3.3.-; EC 2.3.3.9 from Homo sapiens (Human) (see 3 papers)
Q8N0X4 citrate (pro-3S)-lyase (EC 4.1.3.6) from Homo sapiens (see paper)
    31% identity, 96% coverage of query (115 bits)

5vxoA Crystal structure analysis of human clybl in complex with propionyl- coa
    31% identity, 96% coverage of query (115 bits)

PGA1_c30490 Malyl-CoA lyase (EC 4.1.3.24) from Phaeobacter inhibens BS107
    31% identity, 96% coverage of query (114 bits)

YbdW / b0616 citrate lyase β subunit from Escherichia coli K-12 substr. MG1655 (see 2 papers)
CITE_ECOLI / P0A9I1 Citrate lyase subunit beta; Citrase beta chain; Citrate (pro-3S)-lyase subunit beta; Citryl-CoA lyase subunit; EC 4.1.3.6; EC 4.1.3.34 from Escherichia coli (strain K12) (see paper)
    31% identity, 96% coverage of query (108 bits)

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Build an alignment for Ga0059261_0896 and 8 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

CLYBL_MOUSE / Q8R4N0 Citramalyl-CoA lyase, mitochondrial; (3S)-malyl-CoA thioesterase; Beta-methylmalate synthase; Citrate lyase subunit beta-like protein, mitochondrial; Citrate lyase beta-like; Malate synthase; EC 4.1.3.25; EC 3.1.2.30; EC 2.3.3.-; EC 2.3.3.9 from Mus musculus (Mouse) (see 4 papers)
Q8R4N0 citrate (pro-3S)-lyase (EC 4.1.3.6) from Mus musculus (see paper)
    29% identity, 100% coverage of query (106 bits)

mcl1 / B6E2X2 malyl-CoA lyase subunit (EC 4.1.3.24) from Rhodobacter capsulatus (see 2 papers)
MCAL_RHOCA / B6E2X2 L-malyl-CoA/beta-methylmalyl-CoA lyase; (3S)-malyl-CoA/beta-methylmalyl-CoA lyase; EC 4.1.3.24 from Rhodobacter capsulatus (Rhodopseudomonas capsulata) (see paper)
    30% identity, 96% coverage of query (104 bits)

CITEL_MYCTU / P9WPE1 Citrate lyase subunit beta-like protein; EC 4.1.-.- from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
    37% identity, 96% coverage of query (101 bits)

6aq4B / P9WPE1 Crystal structure of protein cite from mycobacterium tuberculosis in complex with magnesium, pyruvate and citramalyl-coa (see paper)
    37% identity, 96% coverage of query (101 bits)

6arbA Crystal structure of protein cite from mycobacterium tuberculosis in complex with magnesium, pyruvate and coenzyme a
    37% identity, 96% coverage of query (101 bits)

6as5A Crystal structure of protein cite from mycobacterium tuberculosis in complex with magnesium, acetoacetate and coenzyme a
    37% identity, 96% coverage of query (101 bits)

MCAL_CERS4 / Q3J5L6 L-malyl-CoA/beta-methylmalyl-CoA lyase; (3S)-malyl-CoA/beta-methylmalyl-CoA lyase; (S)-citramalyl-CoA lyase; EC 4.1.3.24; EC 4.1.3.25 from Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.) (Rhodobacter sphaeroides) (see 2 papers)
Q3J5L6 malyl-CoA lyase (EC 4.1.3.24) from Cereibacter sphaeroides (see 2 papers)
    30% identity, 96% coverage of query (100 bits)

4l9yC / Q3J5L6 Crystal structure of rhodobacter sphaeroides malyl-coa lyase in complex with magnesium, glyoxylate, and propionyl-coa (see paper)
    30% identity, 96% coverage of query (100 bits)

4l9yA Crystal structure of rhodobacter sphaeroides malyl-coa lyase in complex with magnesium, glyoxylate, and propionyl-coa
    30% identity, 96% coverage of query (100 bits)

4l9zA Crystal structure of rhodobacter sphaeroides malyl-coa lyase in complex with magnesium, oxalate, and coa
    30% identity, 96% coverage of query (100 bits)

mclA / P71503 malyl coenzyme A lyase subunit (EC 4.1.3.24) from Methylorubrum extorquens (see paper)
C5B113 malyl-CoA lyase (EC 4.1.3.24) from Methylorubrum extorquens (see paper)
    29% identity, 96% coverage of query (99.8 bits)

5ugrA / C5B113 Malyl-coa lyase from methylobacterium extorquens (see paper)
    29% identity, 96% coverage of query (99.4 bits)

6aq4C Crystal structure of protein cite from mycobacterium tuberculosis in complex with magnesium, pyruvate and citramalyl-coa
    36% identity, 95% coverage of query (99.4 bits)

citE / P17725 citrate lyase β subunit (EC 4.1.3.34) from Klebsiella pneumoniae (see 2 papers)
citE / CAA56216.1 citrate lyase beta-subunit from Klebsiella pneumoniae (see paper)
    30% identity, 96% coverage of query (95.1 bits)

A0A172MLA1 (S)-citramalyl-CoA lyase (EC 4.1.3.25); (R)-citramalyl-CoA lyase (EC 4.1.3.46) from Aspergillus terreus (see paper)
    31% identity, 96% coverage of query (88.2 bits)

Q9I562 (S)-citramalyl-CoA lyase (EC 4.1.3.25) from Pseudomonas aeruginosa (see paper)
    33% identity, 97% coverage of query (88.2 bits)

CITEL_DEIRA / Q9RUZ0 Citrate lyase subunit beta-like protein; EC 4.1.-.- from Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
    33% identity, 96% coverage of query (84.3 bits)

1u5vA Structure of cite complexed with triphosphate group of atp form mycobacterium tuberculosis
    37% identity, 72% coverage of query (81.3 bits)

1sgjA / Q9RUZ0 Crystal structure of citrate lyase beta subunit
    33% identity, 80% coverage of query (80.1 bits)

1sgjB Crystal structure of citrate lyase beta subunit
    33% identity, 80% coverage of query (80.1 bits)

4l80C / S5N020 Crystal structure of chloroflexus aurantiacus malyl-coa lyase in complex with magnesium, oxalate, and propionyl-coa (see paper)
    26% identity, 98% coverage of query (64.7 bits)

mclA / A9WC35 L-malyl CoA lyase subunit (EC 4.1.3.25; EC 4.1.3.24) from Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) (see 2 papers)
MCLA_CHLAU / S5N020 Malyl-CoA/beta-methylmalyl-CoA/citramalyl-CoA lyase; (3S)-3-carboxy-3-hydroxypropanoyl-CoA glyoxylate-lyase; (3S)-citramalyl-CoA pyruvate-lyase; (S)-citramalyl-CoA lyase; Erythro-beta-methylmalyl-CoA; L-malyl-CoA lyase; EC 4.1.3.24; EC 4.1.3.25 from Chloroflexus aurantiacus (see 4 papers)
S5N020 malyl-CoA lyase (EC 4.1.3.24); (S)-citramalyl-CoA lyase (EC 4.1.3.25) from Chloroflexus aurantiacus (see paper)
    26% identity, 98% coverage of query (64.7 bits)

3r4iA / Q13S43 Crystal structure of a citrate lyase (bxe_b2899) from burkholderia xenovorans lb400 at 2.24 a resolution
    26% identity, 82% coverage of query (43.1 bits)

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