Sites on a Tree

 

Searching for up to 100 curated homologs for H281DRAFT_02122 FitnessBrowser__Burk376:H281DRAFT_02122 (1195 a.a.)

Found high-coverage hits (≥70%) to 6 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

BPHYT_RS02015 phenylpyruvate ferredoxin oxidoreductase (EC 1.2.7.8) from Burkholderia phytofirmans PsJN
    94% identity, 100% coverage of query (2315 bits)

HP15_859 phenylpyruvate ferredoxin oxidoreductase (EC 1.2.7.8) from Marinobacter adhaerens HP15
    55% identity, 98% coverage of query (1219 bits)

Psest_3517 branched-chain ketoacid ferredoxin reductase (EC 1.2.7.7) active on 4-methyl-2-oxopentanoate, (S)-3-methyl-2-oxopentanoate, or 3-methyl-2-oxobutanoate from Pseudomonas stutzeri RCH2
    49% identity, 96% coverage of query (1058 bits)

RR42_RS34245 branched-chain alpha-ketoacid:ferredoxin oxidoreductase, fused from Cupriavidus basilensis FW507-4G11
    50% identity, 96% coverage of query (1057 bits)

RR42_RS19540 branched-chain alpha-ketoacid:ferredoxin oxidoreductase, fused (EC 1.2.7.7) from Cupriavidus basilensis FW507-4G11
    49% identity, 96% coverage of query (1053 bits)

salQ / B0L7F0 5-chloro-4-hydroxy-2-oxopentanoate decarboxylase (acylating) from Salinispora tropica (see paper)
    38% identity, 96% coverage of query (678 bits)

Build an alignment

Build an alignment for H281DRAFT_02122 and 6 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory