Searching for up to 100 curated homologs for H281DRAFT_02705 FitnessBrowser__Burk376:H281DRAFT_02705 (365 a.a.)
Found high-coverage hits (≥70%) to 69 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
2ioyA / Q8RD41 Crystal structure of thermoanaerobacter tengcongensis ribose binding protein (see paper)
45% identity, 78% coverage of query (234 bits)
7e7mC / Q8E283 Crystal structure analysis of the streptococcus agalactiae ribose binding protein rbsb
38% identity, 81% coverage of query (193 bits)
RBSB_BACSU / P36949 Ribose import binding protein RbsB from Bacillus subtilis (strain 168) (see 2 papers)
41% identity, 78% coverage of query (190 bits)
RbsB / b3751 ribose ABC transporter periplasmic binding protein from Escherichia coli K-12 substr. MG1655 (see 25 papers)
RbsB / P02925 ribose ABC transporter periplasmic binding protein from Escherichia coli (strain K12) (see 25 papers)
RBSB_ECOLI / P02925 Ribose import binding protein RbsB from Escherichia coli (strain K12) (see 5 papers)
TC 3.A.1.2.1 / P02925 RbsB aka RBSP aka PRLB aka B3751, component of Ribose porter from Escherichia coli (see 11 papers)
rbsB / GB|AAC76774.1 D-ribose-binding periplasmic protein; EC 3.6.3.17 from Escherichia coli K12 (see 11 papers)
38% identity, 80% coverage of query (167 bits)
1dbpA / P02925 Identical mutations at corresponding positions in two homologous proteins with non-identical effects (see paper)
37% identity, 78% coverage of query (166 bits)
5dteB / A6VKG5 Crystal structure of an abc transporter periplasmic solute binding protein (ipr025997) from actinobacillus succinogenes 130z(asuc_0081, target efi-511065) with bound d-allose
34% identity, 75% coverage of query (140 bits)
TC 3.A.1.2.19 / Q9X053 Periplasmic binding protein/LacI transcriptional regulator, component of D-ribose porter (Nanavati et al., 2006). Induced by ribose from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
30% identity, 79% coverage of query (135 bits)
2fn8A / Q9X053 Thermotoga maritima ribose binding protein ribose bound form (see paper)
30% identity, 79% coverage of query (135 bits)
AlsB / b4088 D-allose ABC transporter periplasmic binding protein (EC 7.5.2.8) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
AlsB / P39265 D-allose ABC transporter periplasmic binding protein (EC 7.5.2.8) from Escherichia coli (strain K12) (see 5 papers)
ALSB_ECOLI / P39265 D-allose-binding periplasmic protein; ALBP from Escherichia coli (strain K12) (see paper)
P39265 ABC-type D-allose transporter (EC 7.5.2.8) from Escherichia coli (see paper)
TC 3.A.1.2.6 / P39265 AlsB aka B4088, component of D-allose porter from Escherichia coli (see 6 papers)
alsB / GB|AAC77049.1 D-allose-binding periplasmic protein; EC 3.6.3.17 from Escherichia coli K12 (see 6 papers)
32% identity, 75% coverage of query (129 bits)
1gudA / P39265 Hinge-bending motion of d-allose binding protein from escherichia coli: three open conformations (see paper)
32% identity, 75% coverage of query (129 bits)
1rpjA Crystal structure of d-allose binding protein from escherichia coli
32% identity, 75% coverage of query (129 bits)
THPA_MYCS2 / A0QYB5 D-threitol-binding protein from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
32% identity, 82% coverage of query (126 bits)
6hbdA / A0QT50 Crystal structure of msmeg_1712 from mycobacterium smegmatis in complex with beta-d-galactofuranose (see paper)
31% identity, 72% coverage of query (126 bits)
6hyhA Crystal structure of msmeg_1712 from mycobacterium smegmatis in complex with beta-d-fucofuranose
31% identity, 72% coverage of query (125 bits)
6hbmA Crystal structure of msmeg_1712 from mycobacterium smegmatis in complex with alpha-l-arabinofuranose
31% identity, 72% coverage of query (125 bits)
4rsmA / A0QYB5 Crystal structure of carbohydrate transporter msmeg_3599 from mycobacterium smegmatis str. Mc2 155, target efi-510970, in complex with d-threitol (see paper)
32% identity, 78% coverage of query (124 bits)
8wlbA X-ray structure of enterobacter cloacae allose-binding protein in complex with d-psicose
31% identity, 70% coverage of query (121 bits)
8wl9A X-ray structure of enterobacter cloacae allose-binding protein in complex with d-ribose
31% identity, 70% coverage of query (121 bits)
Build an alignment for H281DRAFT_02705 and 18 homologs with ≥ 30% identity
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PS417_11885 Inositol transport system sugar-binding protein from Pseudomonas simiae WCS417
28% identity, 79% coverage of query (119 bits)
XYPA_MYCS2 / A0QYB3 Xylitol-binding protein from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
31% identity, 78% coverage of query (118 bits)
4rs3A / A0QYB3 Crystal structure of carbohydrate transporter a0qyb3 from mycobacterium smegmatis str. Mc2 155, target efi-510969, in complex with xylitol (see paper)
31% identity, 78% coverage of query (117 bits)
5hkoA Crystal structure of abc transporter solute binding protein msmeg_3598 from mycobacterium smegmatis str. Mc2 155, target efi-510969, in complex with l-sorbitol
31% identity, 78% coverage of query (117 bits)
APIBP_RHIR8 / B9JK76 D-apiose import binding protein; D-apiose binding SBP from Rhizobium rhizogenes (strain K84 / ATCC BAA-868) (Agrobacterium radiobacter) (see paper)
31% identity, 76% coverage of query (110 bits)
BPHYT_RS34250 ABC transporter for L-rhamnose/L-fucose/xylitol, substrate-binding component from Burkholderia phytofirmans PsJN
29% identity, 82% coverage of query (107 bits)
TC 3.A.1.2.11 / Q92WK4 EryG aka RB0335, component of The erythritol permease, EryEFG (Geddes et al., 2010) (probably orthologous to 3.A.1.2.16) from Rhizobium meliloti (Sinorhizobium meliloti) (see paper)
30% identity, 76% coverage of query (105 bits)
4yo7A / Q9KAG4 Crystal structure of an abc transporter solute binding protein (ipr025997) from bacillus halodurans c-125 (bh2323, target efi- 511484) with bound myo-inositol
28% identity, 79% coverage of query (104 bits)
APIBP_RHIEC / Q2JZQ5 D-apiose import binding protein; D-apiose binding SBP from Rhizobium etli (strain CFN 42 / ATCC 51251) (see paper)
30% identity, 71% coverage of query (104 bits)
5ibqA / Q2JZQ5 Crystal structure of an abc solute binding protein from rhizobium etli cfn 42 (rhe_pf00037,target efi-511357) in complex with alpha-d-apiose
30% identity, 71% coverage of query (104 bits)
4ry0A Crystal structure of ribose transporter solute binding protein rhe_pf00037 from rhizobium etli cfn 42, target efi-511357, in complex with d-ribose
30% identity, 71% coverage of query (104 bits)
HSERO_RS05260 ABC transporter for L-fucose, substrate-binding component from Herbaspirillum seropedicae SmR1
30% identity, 76% coverage of query (103 bits)
4ry9A / A1WJM2 Crystal structure of carbohydrate transporter solute binding protein veis_2079 from verminephrobacter eiseniae ef01-2, target efi-511009, a complex with d-talitol
28% identity, 79% coverage of query (100 bits)
4ry9B Crystal structure of carbohydrate transporter solute binding protein veis_2079 from verminephrobacter eiseniae ef01-2, target efi-511009, a complex with d-talitol
28% identity, 79% coverage of query (100 bits)
3ksmA / Q2S7D2 Crystal structure of abc-type sugar transport system, periplasmic component from hahella chejuensis
31% identity, 72% coverage of query (92.8 bits)
6gt9A / W8QN64 Crystal structure of ganp, a glucose-galactose binding protein from geobacillus stearothermophilus, in complex with galactose
23% identity, 76% coverage of query (90.1 bits)
4rxtA / B9JKX8 Crystal structure of carbohydrate transporter solute binding protein arad_9553 from agrobacterium radiobacter, target efi-511541, in complex with d-arabinose
29% identity, 73% coverage of query (89.7 bits)
6guqA Crystal structure of ganp, a glucose-galactose binding protein from geobacillus stearothermophilus, in complex with glucose
23% identity, 76% coverage of query (89.7 bits)
4wutA / B9K0B2 Crystal structure of an abc transporter solute binding protein (ipr025997) from agrobacterium vitis (avi_5133, target efi-511220) with bound d-fucose
26% identity, 79% coverage of query (87.8 bits)
PS417_12055 xylitol ABC transporter, substrate-binding component from Pseudomonas simiae WCS417
29% identity, 77% coverage of query (87.0 bits)
4rxmA Crystal structure of periplasmic abc transporter solute binding protein a7jw62 from mannheimia haemolytica phl213, target efi-511105, in complex with myo-inositol
29% identity, 78% coverage of query (84.3 bits)
4rxmB Crystal structure of periplasmic abc transporter solute binding protein a7jw62 from mannheimia haemolytica phl213, target efi-511105, in complex with myo-inositol
29% identity, 78% coverage of query (84.3 bits)
RALBP_PSEAE / Q9I2F8 D-ribose/D-allose-binding protein from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see paper)
29% identity, 82% coverage of query (83.2 bits)
FRCB_RHIML / Q9F9B2 Fructose import binding protein FrcB from Rhizobium meliloti (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
TC 3.A.1.2.7 / Q9F9B2 FrcB, component of Fructose/mannose/ribose porter from Rhizobium meliloti (Sinorhizobium meliloti) (see paper)
27% identity, 72% coverage of query (83.2 bits)
Pf1N1B4_6035 D-ribose ABC transporter, substrate-binding component RbsB from Pseudomonas fluorescens FW300-N1B4
30% identity, 71% coverage of query (82.4 bits)
TC 3.A.1.2.26 / A6LW10 D-xylose ABC transporter, periplasmic substrate-binding protein, component of Xylose transporter, XylFGH (XylF (R), 359 aas; XylG (C), 525 aas; XylH (M), 389 aas from Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052)
29% identity, 88% coverage of query (82.4 bits)
2rjoA / B2TEP5 Crystal structure of twin-arginine translocation pathway signal protein from burkholderia phytofirmans
26% identity, 71% coverage of query (82.4 bits)
FRUE_BIFLO / Q8G848 Fructose import binding protein FruE from Bifidobacterium longum (strain NCC 2705) (see paper)
27% identity, 74% coverage of query (82.4 bits)
RR42_RS03370 fructose ABC transporter, substrate-binding component (FrcB) from Cupriavidus basilensis FW507-4G11
30% identity, 78% coverage of query (79.0 bits)
B9K0Q5 ABC-type D-galactose transporter (EC 7.5.2.11) from Agrobacterium vitis (see paper)
26% identity, 75% coverage of query (75.1 bits)
4y9tA / B9K0Q5 Crystal structure of an abc transporter solute binding protein (ipr025997) from agrobacterium vitis s4 (avi_5305, target efi-511224) with bound alpha-d-glucosamine (see paper)
26% identity, 75% coverage of query (75.1 bits)
5br1A Crystal structure of an abc transporter solute binding protein (ipr025997) from agrobacterium vitis s4 (avi_5305, target efi-511224) with bound alpha-d-galactosamine
26% identity, 75% coverage of query (74.7 bits)
4pe6B / D6Y8L8 Crystal structure of abc transporter solute binding protein from thermobispora bispora dsm 43833
24% identity, 73% coverage of query (62.8 bits)
TC 3.A.1.2.9 / Q7BSH5 RhaS, component of Rhamnose porter (Richardson et al., 2004) (Transport activity is dependent on rhamnokinase (RhaK; AAQ92412) activity (Richardson and Oresnik, 2007) This could be an example of group translocation!) from Rhizobium leguminosarum (biovar trifolii) (see paper)
23% identity, 72% coverage of query (61.6 bits)
4wwhA / A0QT42 Crystal structure of an abc transporter solute binding protein (ipr025997) from mycobacterium smegmatis (msmeg_1704, target efi- 510967) with bound d-galactose
27% identity, 71% coverage of query (60.5 bits)
5hqjA / B1G1H7 Crystal structure of abc transporter solute binding protein b1g1h7 from burkholderia graminis c4d1m, target efi-511179, in complex with d-arabinose
22% identity, 75% coverage of query (60.1 bits)
4z0nA / D1AWX5 Crystal structure of a periplasmic solute binding protein (ipr025997) from streptobacillus moniliformis dsm-12112 (smon_0317, target efi- 511281) with bound d-galactose
24% identity, 81% coverage of query (53.5 bits)
5kwsA / Q8D072 Crystal structure of galactose binding protein from yersinia pestis in the complex with beta d glucose
22% identity, 79% coverage of query (52.4 bits)
P23905 D-galactose/methyl-galactoside binding periplasmic protein MglB; D-galactose-binding periplasmic protein; GBP; D-galactose/D-glucose-binding protein; GGBP from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
24% identity, 82% coverage of query (50.8 bits)
3uugA Crystal structure of the periplasmic sugar binding protein chve
24% identity, 75% coverage of query (50.1 bits)
3urmA / P25548 Crystal structure of the periplasmic sugar binding protein chve (see paper)
24% identity, 75% coverage of query (50.1 bits)
3ma0A / P37387 Closed liganded crystal structure of xylose binding protein from escherichia coli (see paper)
26% identity, 70% coverage of query (49.7 bits)
1gcaA The 1.7 angstroms refined x-ray structure of the periplasmic glucose(slash)galactose receptor from salmonella typhimurium
24% identity, 80% coverage of query (48.5 bits)
3ga5A X-ray structure of glucose/galactose receptor from salmonella typhimurium in complex with (2r)-glyceryl-beta-d-galactopyranoside
23% identity, 78% coverage of query (48.1 bits)
1jftA / P0ACP7 Purine repressor mutant-hypoxanthine-purf operator complex (see paper)
22% identity, 80% coverage of query (47.8 bits)
PurR / b1658 DNA-binding transcriptional repressor PurR from Escherichia coli K-12 substr. MG1655 (see 7 papers)
PurR / P0ACP7 DNA-binding transcriptional repressor PurR from Escherichia coli (strain K12) (see 3 papers)
PURR_ECOLI / P0ACP7 HTH-type transcriptional repressor PurR; Pur regulon repressor; Purine nucleotide synthesis repressor from Escherichia coli (strain K12) (see 8 papers)
PurR / P0ACP7 Transcription factor PurR (repressor) from Escherichia coli K12 MG1655 (see 5 papers)
22% identity, 80% coverage of query (47.8 bits)
2pubA Crystal structure of the laci family member, purr, bound to dna: minor groove binding by alpha helices
22% identity, 80% coverage of query (47.8 bits)
2puaA Crystal structure of the laci family member, purr, bound to dna: minor groove binding by alpha helices
22% identity, 80% coverage of query (47.8 bits)
1wetA Structure of the purr-guanine-purf operator complex
22% identity, 80% coverage of query (47.8 bits)
4ywhA / A6VLM7 Crystal structure of an abc transporter solute binding protein (ipr025997) from actinobacillus succinogenes 130z (asuc_0499, target efi-511068) with bound d-xylose
25% identity, 76% coverage of query (46.6 bits)
5yszA / Q47RE1 Transcriptional regulator celr-cellobiose complex (see paper)
23% identity, 75% coverage of query (44.3 bits)
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Lawrence Berkeley National Laboratory