Searching for up to 100 curated homologs for H281DRAFT_02714 FitnessBrowser__Burk376:H281DRAFT_02714 (331 a.a.)
Found high-coverage hits (≥70%) to 44 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
TC 3.A.1.2.19 / Q9X050 ABC-type transporter, integral membrane subunit, component of D-ribose porter (Nanavati et al., 2006). Induced by ribose from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
43% identity, 91% coverage of query (228 bits)
PS417_12060 xylitol ABC transporter, permease component from Pseudomonas simiae WCS417
45% identity, 90% coverage of query (226 bits)
TC 3.A.1.2.20 / G4FGN4 Putative beta-xyloside ABC transporter, permease component, component of Glucose porter. Also bind xylose (Boucher and Noll 2011). Induced by glucose (Frock et al. 2012). Directly regulated by glucose-responsive regulator GluR from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
42% identity, 86% coverage of query (215 bits)
AO353_21390 m-Inositol ABC transporter, permease component (iatP) from Pseudomonas fluorescens FW300-N2E3
40% identity, 92% coverage of query (205 bits)
TC 3.A.1.2.18 / Q9WXW7 ABC-type transporter, integral membrane subunit, component of Xylose porter (Nanavati et al. 2006). Regulated by xylose-responsive regulator XylR from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
41% identity, 92% coverage of query (204 bits)
PS417_11895 Inositol transport system permease protein from Pseudomonas simiae WCS417
39% identity, 92% coverage of query (203 bits)
TC 3.A.1.2.13 / A6VKS9 RbsC, component of The probable autoinducer-2 (AI-2;, a furanosyl borate diester: 3aS,6S,6aR)-2,2,6,6a-tetrahydroxy-3a-methyltetrahydrofuro[3,2-d][1,3,2]dioxaborolan-2-uide) uptake porter (Shao et al., 2007) (50-70% identical to RbsABC of E. coli; TC# 3.A.1.2.1) from Actinobacillus succinogenes (strain ATCC 55618 / 130Z)
36% identity, 93% coverage of query (200 bits)
TC 3.A.1.2.16 / Q1M4Q8 Erythritol permease, component of ABC transporter, component of The erythritol uptake permease, EryEFG (Yost et al., 2006) (probably orthologous to 3.A.1.2.11) from Rhizobium leguminosarum bv. viciae (strain 3841) (see paper)
36% identity, 100% coverage of query (200 bits)
eryF / Q2YIY3 putative erythritol ABC transporter membrane protein from Brucella abortus (strain 2308) (see 3 papers)
35% identity, 99% coverage of query (197 bits)
RbsC / b3750 ribose ABC transporter membrane subunit from Escherichia coli K-12 substr. MG1655 (see 5 papers)
RbsC / P0AGI1 ribose ABC transporter membrane subunit from Escherichia coli (strain K12) (see 4 papers)
RBSC_ECOLI / P0AGI1 Ribose import permease protein RbsC from Escherichia coli (strain K12) (see 5 papers)
TC 3.A.1.2.1 / P0AGI1 Ribose transport system permease protein RbsC aka B3750, component of Ribose porter from Escherichia coli (see 6 papers)
42% identity, 90% coverage of query (188 bits)
RR42_RS03365 fructose ABC transporter, permease component (FrcC) from Cupriavidus basilensis FW507-4G11
41% identity, 93% coverage of query (183 bits)
HSERO_RS03645 D-mannose ABC transporter, permease component from Herbaspirillum seropedicae SmR1
37% identity, 86% coverage of query (176 bits)
YphD / b2546 putative ABC transporter membrane subunit YphD from Escherichia coli K-12 substr. MG1655 (see 4 papers)
34% identity, 99% coverage of query (175 bits)
TC 3.A.1.2.11 / Q92WK1 EryF aka RB0338, component of The erythritol permease, EryEFG (Geddes et al., 2010) (probably orthologous to 3.A.1.2.16) from Rhizobium meliloti (Sinorhizobium meliloti) (see paper)
39% identity, 93% coverage of query (173 bits)
HSERO_RS05255 ABC transporter for L-fucose, permease component from Herbaspirillum seropedicae SmR1
39% identity, 92% coverage of query (170 bits)
TC 3.A.1.2.9 / Q7BSH3 RhaP, component of Rhamnose porter (Richardson et al., 2004) (Transport activity is dependent on rhamnokinase (RhaK; AAQ92412) activity (Richardson and Oresnik, 2007) This could be an example of group translocation!) from Rhizobium leguminosarum (biovar trifolii)
36% identity, 93% coverage of query (166 bits)
TC 3.A.1.2.21 / B8H230 Inositol ABC transport system, permease protein IatP, component of The myoinositol (high affinity)/ D-ribose (low affinity) transporter IatP/IatA/IbpA. The structure of IbpA with myoinositol bound has been solved from Caulobacter crescentus (strain NA1000 / CB15N)
39% identity, 85% coverage of query (165 bits)
AraH / b4460 arabinose ABC transporter membrane subunit (EC 7.5.2.13; EC 7.5.2.12) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
araH / P0AE26 arabinose ABC transporter membrane subunit (EC 7.5.2.13) from Escherichia coli (strain K12) (see paper)
ARAH_ECOLI / P0AE26 L-arabinose transport system permease protein AraH from Escherichia coli (strain K12) (see 2 papers)
TC 3.A.1.2.2 / P0AE26 L-arabinose transport system permease protein araH aka b4460, component of Arabinose porter from Escherichia coli (see 7 papers)
araH / GB|AAN43497.1 L-arabinose ABC transporter, permease protein AraH from Escherichia coli K12 (see 2 papers)
36% identity, 87% coverage of query (165 bits)
BPHYT_RS16925 D-galactose ABC transporter, permease component from Burkholderia phytofirmans PsJN
34% identity, 96% coverage of query (157 bits)
AlsC / b4086 D-allose ABC transporter membrane subunit (EC 7.5.2.8) from Escherichia coli K-12 substr. MG1655 (see paper)
AlsC / P32720 D-allose ABC transporter membrane subunit (EC 7.5.2.8) from Escherichia coli (strain K12) (see paper)
ALSC_ECOLI / P32720 D-allose transport system permease protein AlsC from Escherichia coli (strain K12) (see paper)
TC 3.A.1.2.6 / P32720 AlsC aka B4086, component of D-allose porter from Escherichia coli (see 6 papers)
37% identity, 87% coverage of query (157 bits)
Pf6N2E2_5970 ABC transporter for D-galactose/L-arabinose, permease component from Pseudomonas fluorescens FW300-N2E2
35% identity, 100% coverage of query (155 bits)
Pf1N1B4_409 ABC transporter for D-galactose/L-arabinose, permease component from Pseudomonas fluorescens FW300-N1B4
35% identity, 99% coverage of query (153 bits)
HSERO_RS11490 D-ribose ABC transporter, permease component RbsC from Herbaspirillum seropedicae SmR1
33% identity, 99% coverage of query (142 bits)
BPHYT_RS34240 ABC transporter for L-rhamnose/L-fucose/xylitol, permease component from Burkholderia phytofirmans PsJN
36% identity, 82% coverage of query (134 bits)
PS417_18395 D-ribose ABC transporter, permease component RbsC from Pseudomonas simiae WCS417
35% identity, 88% coverage of query (134 bits)
Pf1N1B4_6033 D-ribose ABC transporter, permease component RbsC from Pseudomonas fluorescens FW300-N1B4
34% identity, 88% coverage of query (131 bits)
FRCC_RHIML / Q9F9B1 Fructose import permease protein FrcC from Rhizobium meliloti (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
TC 3.A.1.2.7 / Q9F9B1 FrcC, component of Fructose/mannose/ribose porter from Rhizobium meliloti (Sinorhizobium meliloti) (see 2 papers)
34% identity, 85% coverage of query (129 bits)
LSRC_SALTY / Q8ZKQ3 Autoinducer 2 import system permease protein LsrC; AI-2 import system permease protein LsrC from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
34% identity, 90% coverage of query (127 bits)
YdeY / b1514 Autoinducer-2 ABC transporter membrane subunit LsrC (EC 7.6.2.13) from Escherichia coli K-12 substr. MG1655 (see 2 papers)
lsrC / P77672 Autoinducer-2 ABC transporter membrane subunit LsrC (EC 7.6.2.13) from Escherichia coli (strain K12) (see 2 papers)
LSRC_ECOLI / P77672 Autoinducer 2 import system permease protein LsrC; AI-2 import system permease protein LsrC from Escherichia coli (strain K12) (see 2 papers)
TC 3.A.1.2.8 / P77672 LsrC(M), component of Autoinducer-2 (AI-2, a furanosyl borate diester: (3aS,6S,6aR)-2,2,6,6a-tetrahydroxy-3a-methyltetrahydrofuro[3,2-d][1,3,2]dioxaborolan-2-uide) uptake porter (Taga et al., 2001, 2003) from Escherichia coli (see 6 papers)
lsrC / RF|NP_416031.1 autoinducer 2 ABC transporter, permease protein LsrC from Escherichia coli (see paper)
34% identity, 83% coverage of query (127 bits)
YtfT / b4230 galactofuranose ABC transporter putative membrane subunit YtfT (EC 7.5.2.9) from Escherichia coli K-12 substr. MG1655 (see 3 papers)
YtfT / P39328 galactofuranose ABC transporter putative membrane subunit YtfT (EC 7.5.2.9) from Escherichia coli (strain K12) (see 2 papers)
YTFT_ECOLI / P39328 Galactofuranose transporter permease protein YtfT from Escherichia coli (strain K12) (see paper)
38% identity, 71% coverage of query (126 bits)
Shewana3_2075 L-arabinose ABC transporter, permease component 1 AraW from Shewanella sp. ANA-3
33% identity, 84% coverage of query (126 bits)
YjfF / b4231 galactofuranose ABC transporter putative membrane subunit YjtF (EC 7.5.2.9) from Escherichia coli K-12 substr. MG1655 (see 2 papers)
YjfF / P37772 galactofuranose ABC transporter putative membrane subunit YjtF (EC 7.5.2.9) from Escherichia coli (strain K12) (see 3 papers)
YJFF_ECOLI / P37772 Inner membrane ABC transporter permease protein YjfF from Escherichia coli (strain K12) (see paper)
31% identity, 86% coverage of query (122 bits)
Build an alignment for H281DRAFT_02714 and 32 homologs with ≥ 30% identity
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LSRD_SALTY / Q8ZKQ2 Autoinducer 2 import system permease protein LsrD; AI-2 import system permease protein LsrD from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
27% identity, 92% coverage of query (115 bits)
FRUF_BIFLO / Q8G846 Fructose import permease protein FruF from Bifidobacterium longum (strain NCC 2705) (see paper)
32% identity, 76% coverage of query (115 bits)
XYLH_SULAC / Q4J711 Xylose/arabinose import permease protein XylH from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) (see paper)
Q4J711 ABC-type D-xylose/L-arabinose transporter (subunit 2/2) (EC 7.5.2.13) from Sulfolobus acidocaldarius (see paper)
30% identity, 92% coverage of query (108 bits)
YdeZ / b1515 Autoinducer-2 ABC transporter membrane subunit LsrD (EC 7.6.2.13) from Escherichia coli K-12 substr. MG1655 (see 2 papers)
lsrD / P0AFS1 Autoinducer-2 ABC transporter membrane subunit LsrD (EC 7.6.2.13) from Escherichia coli (strain K12) (see 2 papers)
LSRD_ECOLI / P0AFS1 Autoinducer 2 import system permease protein LsrD; AI-2 import system permease protein LsrD from Escherichia coli (strain K12) (see 2 papers)
TC 3.A.1.2.8 / P0AFS1 LsrD(M)AKA Inner membrane ABC transporter permease protein ydeZ, component of Autoinducer-2 (AI-2, a furanosyl borate diester: (3aS,6S,6aR)-2,2,6,6a-tetrahydroxy-3a-methyltetrahydrofuro[3,2-d][1,3,2]dioxaborolan-2-uide) uptake porter (Taga et al., 2001, 2003) from Escherichia coli (see 6 papers)
lsrD autoinducer 2 ABC transporter, permease protein LsrD from Escherichia coli K12 (see paper)
28% identity, 93% coverage of query (105 bits)
Shewana3_2076 L-arabinose ABC transporter, permease component 2 AraZ from Shewanella sp. ANA-3
34% identity, 82% coverage of query (104 bits)
PGA1_c07310 Inositol transport system permease protein from Phaeobacter inhibens BS107
30% identity, 80% coverage of query (103 bits)
MGLC_SALTY / Q56036 Galactose/methyl galactoside import permease protein MglC from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
34% identity, 90% coverage of query (103 bits)
MglC / b2148 D-galactose/methyl-galactoside ABC transporter membrane subunit from Escherichia coli K-12 substr. MG1655 (see 4 papers)
MglC / P23200 D-galactose/methyl-galactoside ABC transporter membrane subunit from Escherichia coli (strain K12) (see paper)
MGLC_ECOLI / P23200 Galactose/methyl galactoside import permease protein MglC from Escherichia coli (strain K12) (see paper)
TC 3.A.1.2.3 / P23200 MglC aka B2148, component of Galactose/glucose (methyl galactoside) porter from Escherichia coli (see 4 papers)
34% identity, 90% coverage of query (102 bits)
FRUG_BIFLO / Q8G845 Fructose import permease protein FruG from Bifidobacterium longum (strain NCC 2705) (see paper)
31% identity, 72% coverage of query (92.0 bits)
H281DRAFT_01112 deoxynucleoside transporter, permease component 2 from Paraburkholderia bryophila 376MFSha3.1
30% identity, 89% coverage of query (90.5 bits)
H281DRAFT_01115 deoxynucleoside transporter, permease component 1 from Paraburkholderia bryophila 376MFSha3.1
30% identity, 70% coverage of query (85.9 bits)
TC 3.A.1.4.11 / Q6N8W1 Putative branched-chain amino acid transport system ATP-binding protein, component of The phenylpropeneoid uptake porter, CouPSTW from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
27% identity, 72% coverage of query (48.1 bits)
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Lawrence Berkeley National Laboratory