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Searching for up to 100 curated homologs for H281DRAFT_03826 FitnessBrowser__Burk376:H281DRAFT_03826 (283 a.a.)

Found high-coverage hits (≥70%) to 16 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

PP_1171 Uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas putida KT2440
URODH_PSEPK / Q88NN6 Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
Q88NN6 uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas putida KT2440 (see paper)
    55% identity, 93% coverage of query (300 bits)

udh / Q888H1 uronic acid dehydrogenase subunit (EC 1.1.1.203) from Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) (see 2 papers)
URODH_PSESM / Q888H1 Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) (see paper)
Q888H1 uronate dehydrogenase (EC 1.1.1.203) from Pseudomonas syringae pv. tomato (see 4 papers)
    54% identity, 94% coverage of query (296 bits)

PS417_17360 D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas simiae WCS417
    54% identity, 93% coverage of query (292 bits)

Pf1N1B4_4511 D-galacturonate dehydrogenase (EC 1.1.1.203) from Pseudomonas fluorescens FW300-N1B4
    54% identity, 93% coverage of query (291 bits)

HSERO_RS23040 D-galacturonate dehydrogenase (EC 1.1.1.203) from Herbaspirillum seropedicae SmR1
    51% identity, 93% coverage of query (270 bits)

3rfvA / Q7CRQ0 Crystal structure of uronate dehydrogenase from agrobacterium tumefaciens complexed with nadh and product (see paper)
    51% identity, 91% coverage of query (268 bits)

udh / Q7CRQ0 D-uronate dehydrogenase moomer (EC 1.1.1.203) from Agrobacterium fabrum (strain C58 / ATCC 33970) (see 6 papers)
URODH_AGRFC / Q7CRQ0 Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58)) (see 4 papers)
Q7CRQ0 uronate dehydrogenase (EC 1.1.1.203) from Agrobacterium tumefaciens (see 4 papers)
    51% identity, 91% coverage of query (268 bits)

3rfxA Crystal structure of uronate dehydrogenase from agrobacterium tumefaciens, y136a mutant complexed with NAD
    51% identity, 91% coverage of query (264 bits)

D6Y7Y8 uronate dehydrogenase (EC 1.1.1.203) from Thermobispora bispora (see paper)
    43% identity, 90% coverage of query (199 bits)

azf / D4GS48 NAD-dependent glucose-6-phosphate dehydrogenase monomer (EC 1.1.1.388) from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (see paper)
G6PD_HALVD / D4GS48 NAD-dependent glucose-6-phosphate dehydrogenase; Glc6PDH; Archaeal zwischenferment; EC 1.1.1.388 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) (see paper)
D4GS48 glucose-6-phosphate dehydrogenase (NAD+) (EC 1.1.1.388) from Haloferax volcanii (see paper)
    37% identity, 81% coverage of query (129 bits)

Build an alignment

Build an alignment for H281DRAFT_03826 and 10 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

3a1nA / Q97BK3 Crystal structure of l-threonine dehydrogenase from hyperthermophilic archaeon thermoplasma volcanium (see paper)
    28% identity, 82% coverage of query (79.3 bits)

Q97BK3 L-threonine 3-dehydrogenase (EC 1.1.1.103) from Thermoplasma volcanium (see paper)
    28% identity, 82% coverage of query (79.3 bits)

3a4vA Crystal structure of pyruvate bound l-threonine dehydrogenase from hyperthermophilic archaeon thermoplasma volcanium
    28% identity, 82% coverage of query (79.3 bits)

3ajrA Crystal structure of l-3-hydroxynorvaline bound l-threonine dehydrogenase (y137f) from hyperthermophilic archaeon thermoplasma volcanium
    28% identity, 82% coverage of query (77.8 bits)

3a9wA Crystal structure of l-threonine bound l-threonine dehydrogenase (y137f) from hyperthermophilic archaeon thermoplasma volcanium
    28% identity, 82% coverage of query (77.8 bits)

graE / AAA99939.1 dTDP-glucose dehydratase from Streptomyces violaceoruber (see paper)
    27% identity, 74% coverage of query (51.2 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory