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Searching for up to 100 curated homologs for H281DRAFT_03942 FitnessBrowser__Burk376:H281DRAFT_03942 (983 a.a.)

Found high-coverage hits (≥70%) to 17 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

fdsA / CAA11235.1 NAD-dependent formate dehydrogenase alpha subunit from Cupriavidus necator (see paper)
    80% identity, 95% coverage of query (1612 bits)

Q84FW1 formate dehydrogenase (EC 1.17.1.9) from Methylorubrum extorquens (see paper)
    73% identity, 96% coverage of query (1479 bits)

6tg9A / D5AQH0 Cryo-em structure of nadh reduced form of NAD+-dependent formate dehydrogenase from rhodobacter capsulatus (see paper)
    68% identity, 94% coverage of query (1315 bits)

fdhA-I / CAC39234.1 FdhA-I protein from Peptoclostridium acidaminophilum (see paper)
    44% identity, 91% coverage of query (778 bits)

fdhA-II / CAC39239.1 FdhA-II protein from Peptoclostridium acidaminophilum (see paper)
    44% identity, 91% coverage of query (776 bits)

fdhF2 / K0B3A3 formate dehydrogenase H (EC 1.17.1.11) from Gottschalkia acidurici (strain ATCC 7906 / DSM 604 / BCRC 14475 / CIP 104303 / KCTC 5404 / NCIMB 10678 / 9a) (see 4 papers)
K0B3A3 formate dehydrogenase (NAD+, ferredoxin) (subunit 4/4) (EC 1.17.1.11) from Gottschalkia acidurici (see paper)
    42% identity, 92% coverage of query (738 bits)

fdhA / P77908 NADP-dependent formate dehydrogenase α subunit (EC 1.17.1.10) from Moorella thermoacetica (see 3 papers)
    43% identity, 91% coverage of query (728 bits)

7vw6A / C5ATT7 Cryo-em structure of formate dehydrogenase 1 from methylorubrum extorquens am1 (see paper)
    36% identity, 92% coverage of query (569 bits)

fdh1A / Q8KTI7 NAD-dependent formate dehydrogenase α subunit (EC 1.17.1.9) from Methylorubrum extorquens (see 2 papers)
Q8KTI7 formate dehydrogenase (EC 1.17.1.9) from Methylorubrum extorquens (see paper)
    35% identity, 91% coverage of query (566 bits)

E2IQB0 formate dehydrogenase (EC 1.17.1.9) from Clostridium carboxidivorans (see paper)
    37% identity, 71% coverage of query (500 bits)

1fdiA / P07658 Oxidized form of formate dehydrogenase h from e. Coli complexed with the inhibitor nitrite (see paper)
    37% identity, 72% coverage of query (480 bits)

ChlF / b4079 formate dehydrogenase H from Escherichia coli K-12 substr. MG1655 (see 14 papers)
fdhF / P07658 formate dehydrogenase H (EC 1.17.98.4) from Escherichia coli (strain K12) (see 45 papers)
FDHF_ECOLI / P07658 Formate dehydrogenase H; Formate dehydrogenase-H subunit alpha; FDH-H; Formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide; EC 1.17.98.4 from Escherichia coli (strain K12) (see 4 papers)
P07658 formate dehydrogenase (EC 1.17.1.9); formate dehydrogenase (hydrogenase) (EC 1.17.98.4) from Escherichia coli (see 5 papers)
TC 3.D.1.9.2 / P07658 Formate dehydrogenase H, component of Hydrogenase 3, Hyc. Catalyzes H2 from Escherichia coli (strain K12)
    37% identity, 72% coverage of query (476 bits)

2iv2X Reinterpretation of reduced form of formate dehydrogenase h from e. Coli
    37% identity, 72% coverage of query (469 bits)

SFRA_GEOSK / D7AF63 NADPH-Fe(3+) oxidoreductase subunit alpha; Soluble Fe(3+) reductase alpha subunit; EC 1.-.-.- from Geobacter sulfurreducens (strain DL-1 / KN400) (see paper)
SFRA_GEOSL / Q74FU6 NADPH-Fe(3+) oxidoreductase subunit alpha; Soluble Fe(3+) reductase alpha subunit; EC 1.-.-.- from Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) (see 2 papers)
    32% identity, 90% coverage of query (416 bits)

C6WXA3 nitrate reductase (cytochrome) (EC 1.9.6.1) from Methylotenera mobilis (see paper)
    30% identity, 71% coverage of query (333 bits)

Build an alignment

Build an alignment for H281DRAFT_03942 and 15 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

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Change minimum %identity:

Additional hits (identity < 30%)

Q9R6U4 ferredoxin-nitrate reductase (EC 1.7.7.2) from Synechococcus sp. PCC 7002 (see paper)
    28% identity, 71% coverage of query (298 bits)

7t30A / I4BYB4 Structure of electron bifurcating ni-fe hydrogenase complex hydabcsl in fmn/NAD(h) bound state (see paper)
    26% identity, 70% coverage of query (226 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory