Searching for up to 100 curated homologs for H281DRAFT_04062 H281DRAFT_04062 amino acid/amide ABC transporter membrane protein 1, HAAT family (316 a.a.)
Found high-coverage hits (≥70%) to 20 curated proteins.
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
HSERO_RS00885 L-proline ABC transporter, permease component 1 from Herbaspirillum seropedicae SmR1
68% identity, 100% coverage of query (402 bits)
Ac3H11_1695 ABC transporter for glutamine/isoleucine/leucine/phenylalanine/proline/serine/tyrosine, permease component 1 from Acidovorax sp. GW101-3H11
64% identity, 100% coverage of query (389 bits)
AZOBR_RS08235 L-proline and D-alanine ABC transporter, permease component 1 from Azospirillum brasilense Sp245
48% identity, 100% coverage of query (264 bits)
braD / CAB75549.1 integral membrane protein from Rhizobium leguminosarum bv. viciae (see 2 papers)
45% identity, 100% coverage of query (246 bits)
TC 3.A.1.4.8 / P21627 High-affinity branched-chain amino acid transport system permease protein BraD, component of Branched chain amino acid uptake transporter. Transports alanine from Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
49% identity, 99% coverage of query (245 bits)
Pf6N2E2_2923 ABC transporter for L-leucine/L-phenylalanine/D-alanine, permease component 1 LivH from Pseudomonas fluorescens FW300-N2E2
48% identity, 99% coverage of query (238 bits)
LivH / b3457 branched chain amino acid/phenylalanine ABC transporter membrane subunit LivH (EC 7.4.2.2) from Escherichia coli K-12 substr. MG1655 (see 5 papers)
LivH / P0AEX7 branched chain amino acid/phenylalanine ABC transporter membrane subunit LivH (EC 7.4.2.2) from Escherichia coli (strain K12) (see 4 papers)
TC 3.A.1.4.1 / P0AEX7 High-affinity branched-chain amino acid transport system permease protein LivH aka B3457, component of Leucine; leucine/isoleucine/valine porter from Escherichia coli (see 6 papers)
livH high-affinity branched-chain amino acid ABC transporter, permease protein LivH from Escherichia coli K12 (see 6 papers)
43% identity, 99% coverage of query (219 bits)
TC 3.A.1.4.10 / Q8DQI0 ABC transporter membrane-spanning permease-branched chain amino acid transport, component of The branched chain hydrophobic amino acid transporter, LivJFGHM from Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
43% identity, 100% coverage of query (213 bits)
TC 3.A.1.4.3 / Q8VM85 BraD aka Bra2D, component of General L- (and D-)amino acid uptake porter (transports acidic, basic, polar, semipolar and hydrophobic amino acids). The amino and carboxyl groups do not need to be α since γ-aminobutyric acid (GABA) is a substrate. The system may function with additional binding proteins since L-alanine uptake is not dependent on BraC from Rhizobium leguminosarum (biovar viciae) (see paper)
32% identity, 98% coverage of query (141 bits)
TC 3.A.1.4.9 / Q0S718 ABC amino acid transporter, permease component, component of Uptake transporter, CamABCD of cholate (steroid) metabolites, 1β(2'-propanoate)-3aα-H-4α(3"(R)-hydroxy-3"-propanoate)-7aβ-methylhexahydro-5-indanone and a desaturated analog from Rhodococcus sp. (strain RHA1)
32% identity, 97% coverage of query (114 bits)
TC 3.A.1.4.5 / Q8NRW0 UrtA, component of The high affinity urea/thiourea/hydroxyurea porter from Corynebacterium glutamicum (see paper)
30% identity, 97% coverage of query (98.6 bits)
TC 3.A.1.4.2 / P74318 NatD aka LivH aka SLR0949, component of Leucine/proline/alanine/serine/glycine (and possibly histidine) porter, NatABCDE (see paper)
31% identity, 78% coverage of query (98.2 bits)
TC 3.A.1.4.6 / Q8YXD0 NatD, component of The neutral amino acid permease, N-1 (transports pro, phe, leu, gly, ala, ser, gln and his, but gln and his are not transported via NatB) (see paper)
30% identity, 97% coverage of query (87.8 bits)
PGA1_c12660 D-lactate transporter, permease component 2 from Phaeobacter inhibens BS107
30% identity, 98% coverage of query (85.5 bits)
Build an alignment for H281DRAFT_04062 and 14 homologs with ≥ 30% identity
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TC 3.A.1.4.11 / Q6N8W0 Branched-chain amino acid transport system permease protein, component of The phenylpropeneoid uptake porter, CouPSTW from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
26% identity, 75% coverage of query (77.8 bits)
TC 3.A.1.4.7 / Q92TN1 ABC transporter, permease, component of The protocatechuate (3,4-dihydroxybenzoate) uptake porter, PcaMNVWX from Rhizobium meliloti (strain 1021)
25% identity, 96% coverage of query (62.0 bits)
TC 3.A.1.2.21 / B8H230 Inositol ABC transport system, permease protein IatP, component of The myoinositol (high affinity)/ D-ribose (low affinity) transporter IatP/IatA/IbpA. The structure of IbpA with myoinositol bound has been solved from Caulobacter crescentus (strain NA1000 / CB15N)
27% identity, 78% coverage of query (48.9 bits)
AO353_21390 m-Inositol ABC transporter, permease component (iatP) from Pseudomonas fluorescens FW300-N2E3
25% identity, 72% coverage of query (46.2 bits)
PS417_11895 Inositol transport system permease protein from Pseudomonas simiae WCS417
26% identity, 80% coverage of query (45.8 bits)
TC 3.A.1.2.13 / A6VKS9 RbsC, component of The probable autoinducer-2 (AI-2;, a furanosyl borate diester: 3aS,6S,6aR)-2,2,6,6a-tetrahydroxy-3a-methyltetrahydrofuro[3,2-d][1,3,2]dioxaborolan-2-uide) uptake porter (Shao et al., 2007) (50-70% identical to RbsABC of E. coli; TC# 3.A.1.2.1) from Actinobacillus succinogenes (strain ATCC 55618 / 130Z)
27% identity, 85% coverage of query (45.4 bits)
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Lawrence Berkeley National Laboratory