Sites on a Tree

 

Searching for up to 100 curated homologs for H281DRAFT_04742 FitnessBrowser__Burk376:H281DRAFT_04742 (433 a.a.)

Found high-coverage hits (≥70%) to 12 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

5ti1H / Q144Z1 Crystal structure of fumarylacetoacetate hydrolase from burkholderia xenovorans lb400
    88% identity, 99% coverage of query (787 bits)

FAH / P16930 Fumarylacetoacetase (EC 3.7.1.2) from Homo sapiens (see paper)
FAAA_HUMAN / P16930 Fumarylacetoacetase; FAA; Beta-diketonase; Fumarylacetoacetate hydrolase; EC 3.7.1.2 from Homo sapiens (Human) (see 14 papers)
P16930 fumarylacetoacetase (EC 3.7.1.2) from Homo sapiens (see 2 papers)
    59% identity, 94% coverage of query (514 bits)

FAAA_MOUSE / P35505 Fumarylacetoacetase; FAA; Beta-diketonase; Fumarylacetoacetate hydrolase; EC 3.7.1.2 from Mus musculus (Mouse) (see 3 papers)
P35505 fumarylacetoacetase (EC 3.7.1.2) from Mus musculus (see 2 papers)
    58% identity, 94% coverage of query (507 bits)

1hyoB / P35505 Crystal structure of fumarylacetoacetate hydrolase complexed with 4- (hydroxymethylphosphinoyl)-3-oxo-butanoic acid (see paper)
    58% identity, 94% coverage of query (507 bits)

2hzyA Mouse fumarylacetoacetate hydrolase complexes with a transition-state mimic of the complete substrate
    58% identity, 94% coverage of query (507 bits)

1qcoA Crystal structure of fumarylacetoacetate hydrolase complexed with fumarate and acetoacetate
    58% identity, 94% coverage of query (507 bits)

FAAA_RAT / P25093 Fumarylacetoacetase; FAA; Beta-diketonase; Fumarylacetoacetate hydrolase; EC 3.7.1.2 from Rattus norvegicus (Rat) (see paper)
    58% identity, 94% coverage of query (501 bits)

FAAA_CAEEL / Q94272 Fumarylacetoacetase; FAA; Beta-diketonase; Fumarylacetoacetate hydrolase; EC 3.7.1.2 from Caenorhabditis elegans (see paper)
Q94272 fumarylacetoacetase (EC 3.7.1.2) from Caenorhabditis elegans (see paper)
    55% identity, 94% coverage of query (468 bits)

FAH_ARATH / Q8RW90 Fumarylacetoacetase; Fumarylacetoacetate hydrolase; AtFAH; Protein SHORT-DAY SENSITIVE CELL DEATH 1; EC 3.7.1.2 from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
Q8RW90 fumarylacetoacetase (EC 3.7.1.2) from Arabidopsis thaliana (see 3 papers)
    54% identity, 93% coverage of query (457 bits)

FAHA_ASPFU / Q4WHT8 Fumarylacetoacetase fahA; Fumarylacetoacetate hydrolase fahA; L-tyrosine degradation gene cluster protein fahA; Pyomelanin biosynthesis cluster protein fahA; EC 3.7.1.2 from Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) (Neosartorya fumigata) (see 3 papers)
    50% identity, 96% coverage of query (405 bits)

GI|2832727 fumarylacetoacetate hydrolase; EC 3.7.1.2 from Emericella nidulans (see 2 papers)
fahA / CAA05043.1 fumarylacetoacetate hydrolase from Aspergillus nidulans (see paper)
    48% identity, 96% coverage of query (386 bits)

FAAA_EMENI / Q00770 Fumarylacetoacetase; FAA; Beta-diketonase; Fumarylacetoacetate hydrolase; EC 3.7.1.2 from Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans) (see paper)
    48% identity, 96% coverage of query (384 bits)

Build an alignment

Build an alignment for H281DRAFT_04742 and 12 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory