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Searching for up to 100 curated homologs for HSERO_RS00970 FitnessBrowser__HerbieS:HSERO_RS00970 (629 a.a.)

Found high-coverage hits (≥70%) to 8 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

TREH_THEVO / Q978S7 Trehalase; Alpha,alpha-trehalase; EC 3.2.1.28 from Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) (see paper)
    30% identity, 92% coverage of query (287 bits)

A0A0H3WKG6 glucan 1,4-alpha-glucosidase (EC 3.2.1.3) from Corallococcus coralloides (see paper)
    33% identity, 92% coverage of query (285 bits)

TREH_THEAC / Q9HLE2 Trehalase; Alpha,alpha-trehalase; EC 3.2.1.28 from Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) (see paper)
    30% identity, 91% coverage of query (266 bits)

ABC67273.1 glucoamylase (VldI) (EC 3.2.1.3) (see protein)
    31% identity, 93% coverage of query (249 bits)

TREH_MYCTU / P71741 Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
    32% identity, 91% coverage of query (243 bits)

Build an alignment

Build an alignment for HSERO_RS00970 and 5 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

TREH_MYCS2 / A0R0W9 Trehalase; Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase; EC 3.2.1.28 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) (see paper)
ABK72415.1 α,α-trehalase (MSMEG_4535;MSMEG4528) (EC 3.2.1.28) (see protein)
    29% identity, 99% coverage of query (241 bits)

TREH1_SULAC / Q4J7W0 Trehalase 1; Alpha,alpha-trehalase; SaTreH1; EC 3.2.1.28 from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) (see 2 papers)
A0A2Z5U3T3 alpha,alpha-trehalase (EC 3.2.1.28) from Sulfolobus acidocaldarius (see paper)
    30% identity, 90% coverage of query (209 bits)

TREH2_SULAC / Q4J9D4 Trehalase 2; Alpha,alpha-trehalase; SaTreH2; EC 3.2.1.28 from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) (see paper)
    27% identity, 91% coverage of query (204 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory